Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 876 a.a., bifunctional glycosyl transferase/transpeptidase from Rahnella sp. WP5

 Score =  576 bits (1485), Expect = e-168
 Identities = 321/759 (42%), Positives = 452/759 (59%), Gaps = 13/759 (1%)

Query: 23  SQSSKRKSASKSTATARPGWGRRIWSLSWKLGLILFAAMTIYSIYLDQIIARKFEGQK-W 81
           S+ S++    K+    +    RR++ L  KL ++    + IY++YL++ I  + +G K W
Sbjct: 58  SRMSRKAPPRKANKGGKKSARRRLFWLLVKLFVVFLILLGIYAVYLNKQIHDRIDGGKVW 117

Query: 82  HLPAQVFSRSMALYPGAAVSHDQLIAELKLLGYRKVANPRQVGEFSASKTKVDLWRRPFL 141
            LPA V+ R + L P   +S  +++  L+   YR+V    + GEF+     +DL RRPF 
Sbjct: 118 QLPAAVYGRQVNLEPDMQISKAEMVGLLEGTQYREVTRITRPGEFTVHANYIDLLRRPFD 177

Query: 142 HPQGSQEAQRMMISFDSQGVASVARSSDHRELAVFHLEPVLLDRM--ITGDGEDRLFVAT 199
            P+G +      + FD   ++ +    + R+  +F L+P L+  +     +GE RLFV  
Sbjct: 178 FPEGKEGQVNARLMFDGNSLSEIKNLDNQRDFGLFRLDPRLITMLQASNANGEQRLFVPR 237

Query: 200 DKIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFL 259
              P  +VD L+  EDR FYEH G+N ++I RA + N++AG  VQGGSTLTQQL KN FL
Sbjct: 238 SGFPDLLVDTLLATEDRHFYEHDGINFYSIGRAVVANLTAGHAVQGGSTLTQQLVKNLFL 297

Query: 260 SSERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRP 319
           ++ERS+ RK REA+MAI++D  Y KD ILE YLNEVY+GQ  S  + G  LAS +YFGRP
Sbjct: 298 TNERSLSRKAREAVMAILLDADYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRP 357

Query: 320 IAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESP 379
           + EL+L QQA LV  +KG S YNPWR P+ A +RR+LVLRLL++   +    Y      P
Sbjct: 358 VNELSLDQQALLVGMVKGASLYNPWRNPQMALQRRNLVLRLLVDQKVIDQELYDMLSARP 417

Query: 380 LGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRST 439
           LGV+     +  + PAF  +VR EL  + GD +   SG+K++TTLDP++Q+AAE+AV   
Sbjct: 418 LGVQPKGGVISPQ-PAFMQMVRQELQAKLGDKVQDMSGVKIFTTLDPISQDAAEKAVEEG 476

Query: 440 MKNLEQRD--KALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVY 497
           +  L ++     ++  MVV D+Y+  + AMVG     + GFNRA++ RR +GSL KP  Y
Sbjct: 477 IPLLRKKSGLNDIETAMVVVDRYTGEVRAMVGGAETQFAGFNRAMQARRQVGSLAKPATY 536

Query: 498 ATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVN 557
            TAL+  DKY L T L D+P+TL  + G+TWSP+N + QF G+V L+ A  +SMNVPTVN
Sbjct: 537 LTALSQPDKYRLNTILADQPLTLKLANGQTWSPKNDDHQFRGQVLLVDALARSMNVPTVN 596

Query: 558 LGMAIGTDAVATTLAKSGW-DETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNA 616
           LGMA+G D +  TL   G   E++ + PSMLLGA+  +P+ VAQ YQT+A  G    L+A
Sbjct: 597 LGMAVGLDNITKTLIDLGIPKESLNQTPSMLLGAIALTPMEVAQEYQTIASGGNKAPLSA 656

Query: 617 VTHVLDADNQPLSASQRGADQAISVASDFLVQHAMTQVVQSGTATKLGQAFPGVTLAGKT 676
           V  V+  D   L  S   A + I   + +L  +AM QVVQ GT+  L   FP + LA KT
Sbjct: 657 VRSVIAEDGTVLYQSFPQAVRVIPSQAAYLTLYAMQQVVQEGTSRALANKFPKLHLAAKT 716

Query: 677 GTSNDSRDSWFAGFDERNVAAVWVGLDDNGKTSLYGSSGAMAVYQAFLKQRAPISLRRTP 736
           GTSN+ RDSWFAG D   VA  WVG D+NG + L+GS+GA+ +Y  +L+   P  L    
Sbjct: 717 GTSNELRDSWFAGIDGNQVAITWVGRDNNGPSKLWGSTGALVLYGRYLENGTPQPLDLQM 776

Query: 737 VNGVV------SGYFDAKTGVAKQGNCGNVVAVPALAES 769
             G+       SG F         G  G V ++P   +S
Sbjct: 777 PEGISTMNIDGSGNFVCGNSGGLLGGSGAVRSIPVWTDS 815