Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 790 a.a., penicillin-binding protein 1B from Lysobacter sp. OAE881

 Score =  442 bits (1136), Expect = e-128
 Identities = 266/697 (38%), Positives = 409/697 (58%), Gaps = 17/697 (2%)

Query: 40  PGWGRR--IWSLSWKLGLILFAAMTIYSIYLDQIIARKFEGQKWHLPAQVFSRSMALYPG 97
           P W RR  IW L+  +GL L   +  Y++YL+  +  +F   KW +P +V++R + L PG
Sbjct: 17  PQWRRRLVIWVLA-AVGLGL-GFLIPYTLYLNHEVGERFGQLKWQIPTRVYARPLELAPG 74

Query: 98  AAVSHDQLIAELKLLGYRKVANPRQVGEFSASKTKVDLWRRPFLHPQGSQEAQRMMISFD 157
             +    L  EL    Y +    R  G ++ +  +  +  R F    G   A+R+ ++  
Sbjct: 75  RTLDAATLKTELDAAAYHEGDGTRP-GTYARNGGRWTISSRGFQDVDGQVPARRIEVALS 133

Query: 158 SQGVASVARSSDHRELAVFHLEPVLLDRMITGDGEDRLFVATDKIPKAIVDALILVEDRS 217
              VASV  +S  R L    L+P  +  +     E+R  V   ++P+ +V  L  VEDR 
Sbjct: 134 GSKVASVRDASAKRALKSVRLDPARIATLYGQKNEERRLVRLREVPELLVTGLQAVEDRD 193

Query: 218 FYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFLS--SERSIIRKLREALMA 275
           F  HHG++   ++RAA    +A  + QG STLTQQLA++  L    ER+I RK +E L A
Sbjct: 194 FNSHHGIDVSGMVRAAFK--TATGSTQGASTLTQQLARSGLLGIGRERTISRKGKEILYA 251

Query: 276 IIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIAELTLPQQAFLVAAI 335
           ++I+ RYDK  ILEAY N+VY+GQ  ++A+HG+   S+F+FGR +++L+  Q A L+  +
Sbjct: 252 LLIEARYDKGTILEAYFNQVYLGQRGAQAIHGVAAGSEFWFGRDLSDLSTEQIALLIGIV 311

Query: 336 KGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESPLGVRKASKPV-HQKLP 394
           +GPSYY+P R PERA ERR+ VL  + E+  +  A+Y+ A+++PLGV      +   + P
Sbjct: 312 RGPSYYDPRRNPERALERRNFVLGEMHETKLISDAEYERALKAPLGVTTDPGSIAANRFP 371

Query: 395 AFFAVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRSTMKNLE-QRDKALQVG 453
           A+  ++R +L+R +    L  +G+ V + + P AQ  AE AV  T+K L+ +R   LQ G
Sbjct: 372 AYIDLIRRQLARDYPADALAGAGLSVMSGMSPSAQAMAEGAVARTLKGLDNKRRPQLQAG 431

Query: 454 MVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVYATALTHGDKYTLATPL 513
           +VVTD ++  + A+VG +  +  GFNRAVE +RP+GSL+KPFVY  AL    KY+LA+ +
Sbjct: 432 LVVTDVHNGNVVAVVGSRSVAEHGFNRAVEAQRPVGSLLKPFVYLLALAQPGKYSLASWV 491

Query: 514 KDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVNLGMAIGTDAVATTLAK 573
            D P+T+   + K W+P N + +  G V L+ A   S N  TV +GM +  + +A  +  
Sbjct: 492 DDSPVTVALGKNKNWNPGNSDGRSHGTVRLIDALAMSYNQATVRVGMQVDPERIAGLIRT 551

Query: 574 SGWDETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNAVTHVLDADNQPLSASQR 633
               E  P  P+++LGAV+ SP  +AQ+YQ LA  G  + L+AV  VLDA+ + L+   +
Sbjct: 552 LAGIEAAPN-PALILGAVDQSPYAMAQLYQFLASGGEIQPLHAVRGVLDANGKALNRYDK 610

Query: 634 ---GADQAISVASDFLVQHAMTQVVQSGTATKLGQAFPG-VTLAGKTGTSNDSRDSWFAG 689
               A +  ++A+  L+  A+ Q V +GT T+L +   G ++ AGKTGTSND RDSWFAG
Sbjct: 611 EPAPAQEGDAIAAR-LITIALQQAVSNGTGTQLLRDGLGRLSPAGKTGTSNDGRDSWFAG 669

Query: 690 FDERNVAAVWVGLDDNGKTSLYGSSGAMAVYQAFLKQ 726
           +   ++A +WVG D N +T LYG++GAM V+ A   +
Sbjct: 670 WTGDHLAVIWVGNDQNKETGLYGATGAMRVWSAIFSR 706