Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 729 a.a., penicillin-binding protein, 1A family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  227 bits (579), Expect = 2e-63
 Identities = 169/531 (31%), Positives = 249/531 (46%), Gaps = 36/531 (6%)

Query: 208 DALILVEDRSFYEHHGVNPFAIIRAAMVNISAGR---TVQGGSTLTQQLAKNFFLSS--- 261
           +A+I  EDR FY+H G++P  I  A  +N+  GR   +  GGST+TQQ+AK   L +   
Sbjct: 142 NAIIATEDRRFYQHFGISPRGIASAVRINLREGRGPLSGHGGSTITQQVAKLLCLGTPYK 201

Query: 262 ---------------ERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVH 306
                             I RK++E   ++ ++  Y KDEIL  YLN  Y+G        
Sbjct: 202 PESGMTEAEYEADCRRGGIWRKVKEVPYSLALEAAYTKDEILTIYLNRAYLGA----GAR 257

Query: 307 GMGLASQFYFGRPIAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQ 366
           G   ASQ YFG+  AE+   + A L   +  PS + P    ER+Q R   +LRL+ + G 
Sbjct: 258 GFEAASQRYFGKSAAEVDPAEAAMLAGLLVAPSRFAPTNDLERSQRRAATILRLMEQEGY 317

Query: 367 LPVAQYKAAVESPLGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKVYTTLDP 426
           L       A  +P  + +A++   ++   +FA    E    F  S   +  I + TT D 
Sbjct: 318 LSATDAAVARANPATLSEAAE---RRAGGYFADWVMEEGPNFLTSETTEDVI-IRTTFDQ 373

Query: 427 LAQEAAEQAVRSTMKNLEQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRR 486
             Q AAE+A++   +         Q  +VV     A  A + G K+     FNRA +  R
Sbjct: 374 DIQAAAEEALKYVFETKVSPGSKAQAAIVVMSADGAVRAMVGGRKLQVSGAFNRATQALR 433

Query: 487 PIGSLIKPFVYATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTA 546
             GS  KPFVYA AL  G  Y     + D P+T+       WSP+N    F GEV L  A
Sbjct: 434 QTGSAFKPFVYAAALDLG--YRPNDMILDAPLTIDIPGSGPWSPRNYTNNFYGEVTLTEA 491

Query: 547 FKKSMNVPTVNLGMAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQVYQTLA 606
            K S+N P V L   +G + V    +  G    +   P++ LGA   + L +   Y  + 
Sbjct: 492 LKNSLNTPAVRLSEQVGRENVRKVASDFGIAREMAPGPALALGASESTLLEMTAAYAGIL 551

Query: 607 DNGRYRQLNAVTHV-LDADNQPLSASQRG-ADQAISVASDFLVQHAMTQVVQSGTATKLG 664
           + G       +T + L  D++PL     G  ++ +S  +   +   M QV+++GT  +  
Sbjct: 552 NGGSSVAPYGLTELRLLGDSEPLMGQAGGIGERVVSQRAAQELTFMMFQVIETGTGGR-A 610

Query: 665 QAFPGVTLAGKTGTSNDSRDSWFAGFDERNVAAVWVGLDDNGKTSLYGSSG 715
           +   G   AGKTGT+  +RD+WF GF    VA +W+G DDN  T L G +G
Sbjct: 611 KLPDGRQAAGKTGTTQAARDAWFVGFTADYVAGIWMGYDDN--TPLTGVTG 659