Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 733 a.a., multimodular transpeptidase-transglycosylase PbpC from Caulobacter crescentus NA1000

 Score =  232 bits (592), Expect = 5e-65
 Identities = 171/508 (33%), Positives = 246/508 (48%), Gaps = 25/508 (4%)

Query: 202 IPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFLSS 261
           +P  +  A +  EDR FY+H  ++   I RAA +N  AG+T QG STLTQQLAK  FL+ 
Sbjct: 159 VPNYVPMAFLAAEDRRFYQHGAIDVQGIARAAWINWRAGKTRQGASTLTQQLAKGLFLTP 218

Query: 262 ERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIA 321
           +R + RKL+E L+A  ++    KDEILE YLN +Y G       +G+  ASQ YFG+P +
Sbjct: 219 DRVVKRKLQEMLLAYKLEQILTKDEILELYLNRIYFG----AGTYGIDGASQTYFGKPAS 274

Query: 322 ELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESPLG 381
           +LTL + A L +  K PS     R  ERA  R  L+L  + + G +   Q   A++    
Sbjct: 275 QLTLSEAALLASLPKAPSRLALTRDMERALARSRLILANMRKEGWITPEQESRALDDTPR 334

Query: 382 VRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRSTMK 441
           +   +                E  +  G +      + V  T+DPL Q    + VR TM 
Sbjct: 335 LSPMALQDEGDYGWVLDYATAEAVKIAGQN---APDLVVRLTIDPLLQSEGAEVVRQTMA 391

Query: 442 NLEQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVYATAL 501
               R  A Q  ++      A I AMVG    S   FNRAV+ +R  GS  KPFVYA A+
Sbjct: 392 TETTRSGASQAALLSLSADGA-IRAMVGGTDYSESPFNRAVQAKRQPGSTFKPFVYAAAV 450

Query: 502 THGDKYTLATPLK-DEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVNLGM 560
              +K  L T ++ DEP+        TW P+N +  + G + +  A   S+N   V LG 
Sbjct: 451 ---EKGVLPTDMRVDEPVKF-----GTWEPENYSGGYRGPMTVEDALVTSINTVAVKLGQ 502

Query: 561 AIGTDAVATTLAKSGWDETIPEYP--SMLLGAVNGSPLMVAQVYQTLADNGRYRQLNAVT 618
            +G  A+   + + G   ++P  P  S+ LG+   + L +   +Q     G   +   + 
Sbjct: 503 EVGGPAIGDLVRRFG-ITSLPPSPDLSVALGSYEVNLLQITSGFQVFQQGGLRIEPYVIE 561

Query: 619 HVLDADNQPLSASQ--RGADQAISVASDFLVQHAMTQVVQSGTATKLGQAFPGVTLAGKT 676
            +     Q +   Q  +G  +   VA   ++   M +VV  GTA +   A  G  +AGKT
Sbjct: 562 SITTQGGQQIFQHQPPQGERRVYDVAHASMMVKMMKKVVTQGTAQR---AAFGRPVAGKT 618

Query: 677 GTSNDSRDSWFAGFDERNVAAVWVGLDD 704
           GTS + RD+WF GF    V  VWVG DD
Sbjct: 619 GTSQNWRDAWFVGFTPDYVTGVWVGNDD 646