Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 794 a.a., multimodular transpeptidase-transglycosylase PBP 1A from Caulobacter crescentus NA1000

 Score =  229 bits (584), Expect = 4e-64
 Identities = 184/536 (34%), Positives = 262/536 (48%), Gaps = 56/536 (10%)

Query: 201 KIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFLS 260
           K+P  +  A I +EDR FY H GV+P AI RA   N  AG   +GGST+TQQLAKN FLS
Sbjct: 239 KLPPYVPGAFIAIEDRRFYSHMGVDPKAIARAVGRNAQAGGVSEGGSTITQQLAKNAFLS 298

Query: 261 SERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPI 320
           S+R++ RK +EAL+A+ ++ R  KDEIL  YL+ VY G        G+  A++ YFG+P 
Sbjct: 299 SDRNLRRKAQEALIAVYLEARLSKDEILSRYLSSVYFGD----GAFGLRAAARHYFGKPP 354

Query: 321 AELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESPL 380
            +L++ + A L   +K PS   P    E A+ER  +VL  ++E+  +  A+  A  E   
Sbjct: 355 EQLSIGEAAMLAGLVKAPSRLAPTNNIEGARERMRVVLGAMVETKTITQAEADAVGEI-- 412

Query: 381 GVRKASKPVHQKLP--AFFA-----VVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAE 433
                     +KLP  ++FA       R  +  R+G+++       V TTLDP  QE AE
Sbjct: 413 ----LPVEAEEKLPTGSYFADWALPQARALIGARYGETI-------VKTTLDPELQEKAE 461

Query: 434 QAVRSTMKNLEQRDKALQV--GMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSL 491
           + +      +E+  + L V  G +V  +    + AMVG +      FNRA   R+P GS 
Sbjct: 462 RILND---YIERDGQVLNVTQGALVAMRRDGRVVAMVGGRDYKQSQFNRADAERQP-GSA 517

Query: 492 IKPFVYATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSM 551
            K FVY  AL  G   T+ TP+ D P+ ++    K     +  K  + EVPL+TAF  S 
Sbjct: 518 FKLFVYLAALREG--MTVTTPILDTPVQVSGYMPK----NHEGKYHAREVPLITAFAGSS 571

Query: 552 NVPTVNLGMAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRY 611
           NV  V L   +G   V       G  E IP   +M LG    S   +   Y ++A  G Y
Sbjct: 572 NVAAVRLAHDLGPAKVIKVARDLGVTEEIPSDLTMALGTGPMSLTRLTAAYASVA-AGEY 630

Query: 612 RQLNAVTHVLDADNQPLSASQRGADQAISVASDFLVQHAMTQVVQSGT--ATKLGQAFPG 669
                V H +    +P +            A D  V   M  +++S T   T +  A PG
Sbjct: 631 ---PIVPHGVTEFKKPKTK-----------AYDPKVLANMRDLLRSATHRGTGVEAAIPG 676

Query: 670 VTLAGKTGTSNDSRDSWFAGFDERNVAAVWVGLDDNGK-TSLYGSSGAMAVYQAFL 724
               GKTGT+ D  D+ F G+ E  V  VW+G DDN     + G      +++AF+
Sbjct: 677 A--FGKTGTTQDYHDAIFVGYVEDLVVGVWLGNDDNSSMNGVVGGGEPARIWKAFM 730