Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 653 a.a., multimodular transpeptidase-transglycosylase PbpX from Caulobacter crescentus NA1000

 Score =  265 bits (676), Expect = 8e-75
 Identities = 190/587 (32%), Positives = 287/587 (48%), Gaps = 29/587 (4%)

Query: 197 VATDKIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKN 256
           V  D +PK +  A I +EDR FY H G NP+ IIR+A  N++     +GGST+TQQLA+N
Sbjct: 84  VDLDALPKYVPAAFIAIEDRQFYHHFGFNPWGIIRSAAWNLTHDGPQRGGSTITQQLARN 143

Query: 257 FFLSSERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYF 316
            FLS  ++  RK +E ++AI ++ ++ K +IL  Y+N VY G       +G+  ASQ YF
Sbjct: 144 LFLSPAQNYRRKAQELILAIWLELKFSKKQILALYMNRVYFG----AGAYGIEAASQRYF 199

Query: 317 GRPIAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAV 376
            +P  +LT+ + A L   +KGP+ Y+P    ERA  R  +VL  ++    +   +   A 
Sbjct: 200 NKPANQLTIGEAALLAGMMKGPARYSPVSAKERAARRATIVLDEMVRIKAITAEERDEAF 259

Query: 377 ESPLGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAV 436
            +P  V+ ++   +Q+   F   +  ++    G+       + V TT+D   Q AAE+AV
Sbjct: 260 RTP--VQVSATLANQRAQYFTDYIDAQVRSLVGE---PTEDLVVETTMDLPIQVAAERAV 314

Query: 437 RSTMKNLEQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFV 496
           +  ++      + +Q   +V       I A VG    +   F+RA   RR  GS  KPFV
Sbjct: 315 KLGVEG--HIKQGVQQAALVAIDGEGRIRAYVGGADYNDSQFDRATTARRQAGSAFKPFV 372

Query: 497 YATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTV 556
           + TA+  G   T    + DEP+ + N     W P+N   ++ G + L TA  +S+N    
Sbjct: 373 FLTAMEAG--RTPNVMVVDEPVKIGN-----WEPKNYTNKYLGPITLQTALAQSINTVAA 425

Query: 557 NLGMAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNA 616
            L   +GT  VA T  + G    I   PSM LGAV  SP+ +AQ Y   A+ G   +   
Sbjct: 426 RLANEVGTSNVAATARRLGITSKIQLDPSMALGAVEVSPMEMAQAYAPFANGGFLAKGYG 485

Query: 617 VTHVLDADNQPL---SASQRGADQAISVASDFLVQHAMTQVVQSGTATKLGQAFPGVTLA 673
           +  +  A  + L   S  ++     I   S   +   M +VV +GT T+   A     +A
Sbjct: 486 IERIRTASGKVLYDHSVDKQARAAVIGSPSLQYMNQMMREVVATGTGTRARVA--SYDIA 543

Query: 674 GKTGTSNDSRDSWFAGFDERNVAAVWVGLDDNGKTSLYGSSGAMA-VYQAFLKQRAPISL 732
           GKTGT++D +D+WF G+    V AVW G DD          GA A V++ F+    P  L
Sbjct: 544 GKTGTTSDYKDAWFVGYTGGFVTAVWTGKDDATPMKRVTGGGAPAEVWRVFMAAALP-RL 602

Query: 733 RRTPVNGVVSGYFDAKTGVAKQGNCGNVVAVPALAESYRPAKNCGEP 779
           + TP+ G   G+ +    VA     G++V  P   E        GEP
Sbjct: 603 KATPIPG---GFIEPPP-VAPIDPIGDLVDAPPAPEGPAAEAPAGEP 645