Pairwise Alignments

Query, 462 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 457 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  165 bits (417), Expect = 3e-45
 Identities = 134/459 (29%), Positives = 215/459 (46%), Gaps = 22/459 (4%)

Query: 3   LARNILLVDDEASWLRTLAVTLNRLVPEAEI-DTCVDSRQVLNRLQVGDYALVLLDLTMP 61
           LAR +L+VDDEA     + +TL+R+   A+   T  ++R+ L R     Y L L D+ +P
Sbjct: 14  LAR-VLVVDDEADIRELVDLTLSRMGLAADCAGTVAEAREFLAR---ESYQLCLTDMRLP 69

Query: 62  FHSGEELLGMIRAEHPNTRVIIVTGVNEVDTAVRCIKHGAYDYFIKTDNVSDLAHTVRRA 121
              G EL+ +I  ++  T V ++T     + AV  +K GA+DY  K   +  L   ++ A
Sbjct: 70  DGEGLELVRLIGEQYSETPVAVITAFGSTENAVAALKAGAFDYLAKPVALDQLRTLIKSA 129

Query: 122 LEVVGLERNYLHIKERFLSRTLDNPKAFNNILTCEPVLLDQFRYLEAVAFSPEPLLIHGE 181
           +++          +   L + L + +A + +             +  +A S  P+ I GE
Sbjct: 130 IDLPVASAAEGAPRSEAL-QLLGDSRAMSTVR----------EIIAKLARSQAPVYISGE 178

Query: 182 SGTGKSEFARSCHQLFSPEQ-PFVSLNLAGINSDTFELKLCGRLSHKPNGEVDAVTGMLH 240
           SG GK   AR  H+  +  Q PFV +N   I  +  E +  G       G      G   
Sbjct: 179 SGCGKELAARLIHEQSNRSQAPFVPVNCGAIPENLMESEFFGYRKGAFTGAEQDREGFFQ 238

Query: 241 QAGSGVLYLSEIGALPLSAQITLLELIESRSYSPQGSDSRFPIKCKFVVSTQDDLLTLNK 300
            AG G L+L E+  LPLS Q+ LL  I+ +     G+     +  + + +T  DL    +
Sbjct: 239 AAGGGTLFLDEVADLPLSMQVKLLRAIQEKRVRKVGATVEEAVDVRLICATHQDLKACVE 298

Query: 301 AGEFRSDLLYRLRAHKIRLPRLAERPLDIAMLINHFIAEAAEEMSLSAPQQPRDLAPKLL 360
           AG FR DL YRL   ++R+P L ER  DI  L    +   A + S        + A  L 
Sbjct: 299 AGTFRQDLYYRLNVIELRMPPLRERAEDIPQLARACLDRLAHQASALPLTSAAEAA--LC 356

Query: 361 DYDFPGNLNELKGMVFDAVSRSDGVTLNISPFMEAIKEHKSLDAAPGDHIIFPKSLPT-L 419
            Y FPGN+ EL+ ++  A +   G  ++      ++ +    DA  G      +SL T L
Sbjct: 357 RYTFPGNVRELENILERATALCSGSEIDEGDLQLSLADDGHPDA--GSEGRGGESLDTYL 414

Query: 420 AQMNQALIDEAMSRTANNQTAAAQILGISQSALSRRLTK 458
            ++ +  I EA+ +T  N+TAAA++LGI+  +L  R+ +
Sbjct: 415 DRLERQAIQEAVVQTQGNRTAAARLLGITFRSLRYRMAR 453