Pairwise Alignments

Query, 462 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 470 a.a., DNA-binding transcriptional regulator NtrC from Enterobacter sp. TBS_079

 Score =  166 bits (420), Expect = 2e-45
 Identities = 133/475 (28%), Positives = 217/475 (45%), Gaps = 41/475 (8%)

Query: 7   ILLVDDEAS--WLRTLAVTLNRLVPEAEIDTCVDSRQVLNRLQVGDYALVLLDLTMPFHS 64
           + +VDD++S  W+   A+T   L       T     +VL+ L      ++L D+ MP   
Sbjct: 6   VWVVDDDSSIRWVLERALTGAGL----SCTTFESGSEVLDALTTKTPDVLLSDIRMPGMD 61

Query: 65  GEELLGMIRAEHPNTRVIIVTGVNEVDTAVRCIKHGAYDYFIKTDNVSDLAHTVRRALEV 124
           G  LL  I+  HP   VII+T  +++D AV   + GA+DY  K  ++ +    V RA+  
Sbjct: 62  GLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS- 120

Query: 125 VGLERNYLHIKERFLSRTLDNPKAFNNILTCEPVLLDQFRYLEAVAFSPEPLLIHGESGT 184
                   H +E+   R   +     +I+   P + D FR +  ++ S   +LI+GESGT
Sbjct: 121 --------HYQEQQQPRHTPDFGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGT 172

Query: 185 GKSEFARSCHQLFSP--EQPFVSLNLAGINSDTFELKLCGRLSHKPNGEVDAVTGMLHQA 242
           GK   A + H+  SP  + PF++LN+A I  D  E +L G       G      G   QA
Sbjct: 173 GKELVAHALHR-HSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQA 231

Query: 243 GSGVLYLSEIGALPLSAQITLLELIESRSYSPQGSDSRFPIKCKFVVSTQDDLLTLNKAG 302
             G L+L EIG +PL  Q  LL ++    +   G  +   +  + + +T  +L    + G
Sbjct: 232 DGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEG 291

Query: 303 EFRSDLLYRLRAHKIRLPRLAERPLDIAMLINHFIAEAAEEMSLSAPQQPRDLAPKLLDY 362
           +FR DL +RL   ++ LP L ER  DI  L  HF+  AA E+ + A Q   +    L   
Sbjct: 292 KFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKQLHPETDAALTRL 351

Query: 363 DFPGNLNELKGMVFDAVSRSDGVTLNISPFMEAIKEHKSLDAAPGDHIIFPKSLPTL--- 419
            +PGN+ +L+         + G  + I      + E  + +++ G  +  P S  TL   
Sbjct: 352 AWPGNVRQLENTCRWLTVMAAGQEVLIQDLPAELFEATAPESSTGHAL--PDSWATLLAQ 409

Query: 420 ------------------AQMNQALIDEAMSRTANNQTAAAQILGISQSALSRRL 456
                              +M + L+  A+  T  ++  AA++LG  ++ L+R+L
Sbjct: 410 WADRALRSGHQNLLSEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKL 464