Pairwise Alignments

Query, 289 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 309 a.a., DMT(drug/metabolite transporter) superfamily permease from Dechlorosoma suillum PS

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 13/280 (4%)

Query: 6   WIRLLLLTSVTMLAFAANSLFCREALASGSIGAASFTLIRIASGALVLGI---LASRHIR 62
           W+ LL L  V  L +    +  ++ LA  +  A  F   R    AL L +   L  + +R
Sbjct: 7   WLPLLALV-VLSLTWGYTWVLAKQGLAHAAPFA--FAAERCIGAALALVVVLRLLGKPLR 63

Query: 63  AGELGGNW-LSATALFGYAVAFSFAYNSLSAGTGALLLFGAVQITMILYGLWSGERINRK 121
               G    +  T + G+ V  ++A      G  A+L+F     T++L     GER+  K
Sbjct: 64  LVAPGQTLAIGLTQVAGFMVFQTWALVEGGPGKTAVLIFTMPIWTLLLAWPILGERVRGK 123

Query: 122 QMIGALLAGAGLVWLVLPGVSAPPLIGAMLMIIAGVSWGVYSLLGRGTKRP------TLA 175
           Q + A     GL+ ++ P      L    L ++A + W V ++L +  +         L 
Sbjct: 124 QWLAAGSTLVGLLLIIAPWDMHSSLFSKFLGLMAALCWAVGTILIKRLRGAQPVDLLVLT 183

Query: 176 TAGNFIRAVPMALVPFALLSNSETISATGIGYAVASGALASGLGYALWYLVLPSLSAVTA 235
           T    I AVP+ L+   +  +    + + +G  +     ++ L + LW  +L  + A  A
Sbjct: 184 TWQMIIGAVPLTLLALVVPEHPTDWNLSYVGILMFMSVASTALCWWLWIYILDRVPAWEA 243

Query: 236 ATVQLSVPIIAAFGGFIWIGEAFTSRLLLASIAVLGGIAL 275
           +   L  P++A     +  GEAF +  +   + + GG+AL
Sbjct: 244 SLSVLGTPVVAILSSRLTFGEAFQASEVAGILLIGGGLAL 283