Pairwise Alignments

Query, 289 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 282 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  234 bits (596), Expect = 2e-66
 Identities = 136/272 (50%), Positives = 173/272 (63%), Gaps = 4/272 (1%)

Query: 7   IRLLLLTSVTMLAFAANSLFCREALASGSIGAASFTLIRIASGALVLGILA--SRHIRAG 64
           +RL LL ++TM AFAANSL  R ALA G IG A+F  IR+ SGALVL +L   +R +R  
Sbjct: 7   LRLFLLVALTMTAFAANSLLNRAALAGGEIGPAAFAAIRLGSGALVLALLVMRTRPLRLR 66

Query: 65  ELGGNWLSATALFGYAVAFSFAYNSLSAGTGALLLFGAVQITMILYGLWSGERINRKQMI 124
           +  G W+   +L  Y   FS+AY SL AG GAL+LFG VQITM    L S + I   + +
Sbjct: 67  K-PGRWIGVGSLALYMAGFSYAYLSLDAGLGALILFGGVQITMFAGALLSRDAIPVTRWL 125

Query: 125 GALLAGAGLVWLVLPG-VSAPPLIGAMLMIIAGVSWGVYSLLGRGTKRPTLATAGNFIRA 183
           GA LA AGL  L+ PG V  P  +G  LM +A V WG+YSL GRG+  P   TA NF+  
Sbjct: 126 GAGLALAGLALLLWPGAVGRPDPLGLALMSLAAVGWGIYSLHGRGSTEPLADTAANFVLT 185

Query: 184 VPMALVPFALLSNSETISATGIGYAVASGALASGLGYALWYLVLPSLSAVTAATVQLSVP 243
           +P+ L+  A+  +   IS  GI  AV  GA+ SGLGYALWY VLP L A  AA  QL+VP
Sbjct: 186 LPLCLLVVAIWPDGVAISLWGIVLAVICGAVTSGLGYALWYTVLPQLGASRAAVAQLTVP 245

Query: 244 IIAAFGGFIWIGEAFTSRLLLASIAVLGGIAL 275
           +IA+ GG + +GEA T   +LA++ VLGG+AL
Sbjct: 246 VIASLGGLLLLGEAITLLSVLATVLVLGGVAL 277