Pairwise Alignments

Query, 744 a.a., acyl-CoA dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 760 a.a., acyl-CoA dehydrogenase from Vibrio cholerae E7946 ATCC 55056

 Score =  671 bits (1731), Expect = 0.0
 Identities = 354/733 (48%), Positives = 481/733 (65%), Gaps = 7/733 (0%)

Query: 7   FKKVLPSISTTEQEALDAGDVWLEGSIYQGIPDFDALRQVPGATLSDEEQAFLDGPVQTL 66
           FKKVLP +S TE+EA++AG VW +G ++ G PDF  L   P  TLS EEQ+F+D  ++TL
Sbjct: 17  FKKVLPPLSQTEKEAMEAGSVWWDGELFSGKPDFTKLHHYPKPTLSAEEQSFIDNELETL 76

Query: 67  IEMVDDFAI-QNSLHLPDNILNFLKEHKFFSLIIPKAFGGLEFSPYANSTIVATIAAKSS 125
           + M+DD+ I +    LP  + ++L++ +FFSLII K +GG EFS  ANSTIV+ IA +S 
Sbjct: 77  LAMLDDYKIVKQDRDLPKEVWDYLRKERFFSLIISKEYGGREFSALANSTIVSRIATRSI 136

Query: 126 AVAVTVMVPNSLGPGELLMHYGTQAQQDFWLPRLANGQEIPCFALTSPEAGSDAGGIPDI 185
           + AVTVMVPNSLGPGELL HYGTQ Q+D+WLPRLA+G +IPCFALT PEAGSDAG IPD 
Sbjct: 137 STAVTVMVPNSLGPGELLSHYGTQEQKDYWLPRLADGTDIPCFALTGPEAGSDAGSIPDQ 196

Query: 186 GTVTMGEYQGEQVLGLSVTWDKRYITLAPIATVLGLAFKVEDPQGLLGGKEQLGITCALI 245
           G V  G+++G+ VLG+ ++W+KRYITLAP+ATVLGLAFK+ DP+ LLG KE++GITCALI
Sbjct: 197 GVVCYGKHEGKDVLGIRLSWNKRYITLAPVATVLGLAFKLSDPEHLLGDKEEIGITCALI 256

Query: 246 PKSHPGVELGNRHDPMGCRFYNGTTRGENVFIPMDFIIGGQQNIGRGWQMLVACLGAGRG 305
           P SH GVE+G RHDP+G  F NG TRG++VFIPMD++IGG    G+GW+MLV CL AGRG
Sbjct: 257 PASHEGVEIGERHDPLGLAFMNGPTRGQDVFIPMDWLIGGADYAGKGWRMLVECLSAGRG 316

Query: 306 ISLPALGVSVSQASFKSSAEYAAVREQFGLAIGKFEGIQEKLADIAGKTYLQEAMRVLTT 365
           ISLPALG ++   + +++  Y  VR+QFG++IGKFEG+ E +  I G TYL EA R LTT
Sbjct: 317 ISLPALGTAIGHLTARTTGAYGYVRKQFGMSIGKFEGVAEAMGRIGGLTYLLEATRTLTT 376

Query: 366 EGLGLGLKPSVVTAMAKYHMTEIGRDVLNSAMDIQAGKAIQRGPQNTLASGYVAQPIAIT 425
             L L  KP +VTA+AKYHMTEI R +LN AMDI +G+AIQ GP N LA+ Y+  P+AIT
Sbjct: 377 TSLDLKEKPGIVTAIAKYHMTEIARTILNDAMDIHSGRAIQDGPMNYLATHYLGVPVAIT 436

Query: 426 VEGANILTRNLMIFGQGVMRCHPH-LQSMVEAIHSDDKDADKTFNRIFKQTVGYSVGNSL 484
           VEGANILTRNLMIFGQG  RCHP+ L+ M  A + D ++  K F+ +  + + ++  NS 
Sbjct: 437 VEGANILTRNLMIFGQGATRCHPYVLKEMEAAANPDQQEGAKAFDELLFKHIAHATKNSF 496

Query: 485 RAFRLGLLPFTADAKSELSEVVEYEKAVHKLASKLAVYADFSLLVLGGKLKQAEMLSARL 544
            A    L        +      +Y K + +L+  LAV AD ++L LGG+LK+ EM+SARL
Sbjct: 497 GALFAALTGSRFIKANMSGPTQDYYKQMTRLSRALAVSADVAMLTLGGELKRKEMISARL 556

Query: 545 GDVMSYLYAAMASIRYYEQKVSSEHRAQAKPYFEYATRWALVNAENALLSFLDNFPSAAT 604
           GD +SYLY   A ++ YE +    H+A    Y  YA ++ L +A  +L     N+P    
Sbjct: 557 GDALSYLYMGSAVLKKYEDE--GRHQADL-DYVHYAMQYCLHHAAKSLNQAYRNYPVTGV 613

Query: 605 RQLMKLITVTYSPKMKKINDDLIRELAHEAQLNTQIKRQLTHLVKPVPGDGNDIN--QQA 662
             ++K +           +D+L  +LA         + +LT L     G+ + +   ++A
Sbjct: 614 GAILKGLLFPLGNHFAPPSDELAVKLAESLMTPGAHRDRLTALCYIGKGEDDSVGLMEKA 673

Query: 663 YLAKIACLPLLAKVKKGLKQGYFKSGVRFAQTLDRAREAKIITEGEHKQLLDYNLKRERA 722
           +LA  +   L  K+++G+K+G           L +A +A +++  E   +L     R RA
Sbjct: 674 FLAMYSVKGLERKLQQGVKEGKVARKGLLVDRLAQAEQAGVLSADEVASILAAEKLRSRA 733

Query: 723 IRVDEFDFDMQLI 735
           I+VD F  D   I
Sbjct: 734 IQVDHFSHDFSQI 746