Pairwise Alignments

Query, 248 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

Subject, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 9/232 (3%)

Query: 1   MSLLLSSRPVGAASLRMLTEEWAPMSYQEQGLPMGYGVSLVQRLAKELGEEANIEVLPWA 60
           +S++L S    A ++    + W P    E     G  V +V       G      ++PW+
Sbjct: 9   ISVVLCSFSAWAQTITAAQDPWPPF-VMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWS 67

Query: 61  RAF-AIAEGQANVLLFATSLNEQRSRDFDFVGPIATTSISIYAKADDRVNPASVAELDAL 119
           RA   + EG+ ++L  AT   ++R+    +     T  +    KA D    A +A L+  
Sbjct: 68  RALNDVKEGKIDILP-ATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNG- 125

Query: 120 GSVGVYRG-SLGESILTRQGVEHLTVASFPQQSARQLQHDRIRFWCQADLAVERLLAEVN 178
             VG+ RG   G+  +              +Q+ ++LQ  RI    + +L  + ++ E  
Sbjct: 126 KKVGIVRGYGYGDEFMNDPSFFRPESTDL-KQNLQKLQAGRIDLAVEDELVAKSIITEAG 184

Query: 179 MGL-DEVHPVLELAQIDLYLAFSKGT--DPERVSRWHEALVKLQASGEMARL 227
           M L D       +++  L++   K      E V+ +++ L +++A+G   +L
Sbjct: 185 MNLADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKL 236