Pairwise Alignments

Query, 627 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 678 a.a., penicillin-binding protein 2 from Sphingomonas koreensis DSMZ 15582

 Score =  278 bits (710), Expect = 7e-79
 Identities = 194/604 (32%), Positives = 293/604 (48%), Gaps = 36/604 (5%)

Query: 13  AAEASLFKRRAIFTFACVVVLLSILLGNLYHLQVLSYKDYETRSNDNRIRVVPVAPSRGL 72
           A ++  F RRA+F  A  V    IL   +  L V     Y   +  NR+ +  + P RG 
Sbjct: 11  AQQSYSFSRRALFLGAAQVTGGLILAARMTWLSVYENDKYRLLAESNRVNLTLIPPRRGW 70

Query: 73  IYDRHGQLLAENQPFYSLELIPEKVKDVPA--TLDELAKVVELSKDDRESLVASLKYHRR 130
           I DR G  +A N+  + +++IP++++       L  L  ++ L+ +D   +   LK    
Sbjct: 71  IVDRAGVPIANNRTDFRVDIIPDRMEKESRGRVLAALRDLLALTAEDLVRIEEDLKGAAG 130

Query: 131 FKPITVKNRLSEEEVAIFSVNQHRFPGFSIDAGLKRHYPYDGLLTHVLGYVGRINNRDQA 190
           F+P+ V   L  E  A  SV     PG +   G  R+YP    + H++GYVG        
Sbjct: 131 FQPVQVAENLDWERFAAVSVRLPELPGVAPTRGFARNYPAGAAVAHLVGYVGAATA---- 186

Query: 191 ALQRNGQWQNYAATKD---------IGKQGIEKFYESLLHGMPGHLEEEVNNRGRTIRTL 241
                   + + A+KD         +GK G+EK  E  L G PG    EV  RG+ +R L
Sbjct: 187 --------EQFKASKDPLLLTPGFKLGKDGLEKVLEGELRGKPGAKRVEVTARGKLVREL 238

Query: 242 KSVAPEPGQDIYLTLDLQLQKKAMELLAGRRGSIVAIDPRDGGILAMVSSPSYDPNQFVH 301
            +   EPG+ + LT+D  LQ+ A   L    GS+   D  +G ILAMVS P+YDPN F  
Sbjct: 239 ATRPDEPGKTVRLTIDAGLQEYAARRLGNESGSVTVFDVTNGDILAMVSMPAYDPNAFSD 298

Query: 302 GISSKAYSDLLNARSRPLINRATQGQYAPASTVKPHMALLGLEEKVVTPKTRVWDPGFWQ 361
           GIS   +  L      PL+N+  QG Y P ST KP  AL  L    + PK  V+  G +Q
Sbjct: 299 GISRTEWKMLSEDDHLPLMNKTLQGLYPPGSTFKPATALAILSAG-IDPKRVVYCNGGYQ 357

Query: 362 IPGVERKYRDWKRWGHGWVDVNGALVHSCDTYFYDMAYKTGIDKISNFMQQFGFGERTGV 421
           +    R++    R  HG + ++ A+  SC+TYFY +  + GI+ I+   ++ GFG    +
Sbjct: 358 LG--NRRFGCLGR--HGPMTMHTAIARSCNTYFYTLGREIGIEAIAAAARKLGFGAEFEL 413

Query: 422 DIFEESAGNMPSKDWKRLKYNQPWYIGDTISVGIGQGYWTTTPLQLANATAIMANKGERF 481
            +  +  G +P   WK  +Y Q W   DT++  IGQGY   +P QLA + A +A+ G   
Sbjct: 414 PLPSQRYGTIPDSAWKMRRYKQEWTQADTLNAAIGQGYVLVSPFQLALSAARIAS-GHEL 472

Query: 482 VPHLLKSIKNDTVKVDTPVDKMAPVVLKSPHNWQIINEAMRDTAHKSRFVDAGYTAAMKT 541
           +P LL + +     +D P + +A V        +++N   R TA  S+    G     KT
Sbjct: 473 IPSLLAAKRAAPRHLDFPEEHLAIVRAGMD---EVVNG--RGTAGASKLRLDGIRMGGKT 527

Query: 542 GTAQVFSVAEDEKYDAENIDEHLRDNALIVAYAPYEAPRIVLAVVLENAGWGGANAGPVA 601
           GTAQV  + +  +   +  +   RD+ L V +AP + PR   +VV+E+   G   A PVA
Sbjct: 528 GTAQVRRIMDRNR--GQGGEWKYRDHGLFVCFAPVDNPRYAASVVIEHGMGGARAAAPVA 585

Query: 602 RALL 605
           + +L
Sbjct: 586 KDVL 589