Pairwise Alignments

Query, 627 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 672 a.a., cell elongation specific D,D-transpeptidase from Caulobacter crescentus NA1000

 Score =  338 bits (867), Expect = 4e-97
 Identities = 215/621 (34%), Positives = 332/621 (53%), Gaps = 40/621 (6%)

Query: 18  LFKRRAIFTFACVVVLLSILLGNLYHLQVLSYKDYETRSNDNRIRVVPVAPSRGLIYDRH 77
           +F RRA        + L  L G L  LQ++  + Y+  S  N+     V P RGLI DR+
Sbjct: 17  VFHRRAFLLGGLTGLGLLTLGGRLAQLQLVEAQRYQKLSAGNQFNYRLVPPPRGLIMDRN 76

Query: 78  GQLLAENQPFYSLELIPEKVKDVPATLDELAKVVELSKDDRESLVASLKYHRRFKPITVK 137
           G  LA N+P + L +  EK  +  A LD+L+K+V +    R  ++  L    R  P+ V 
Sbjct: 77  GVSLASNRPNFRLMINKEKGLEAEAVLDDLSKLVPIDGTRRARILKELDRAPRKAPVVVM 136

Query: 138 NRLSEEEVAIFSVNQHRFPGFSIDAGLKRHYPYDGLLTHVLGYVGRINNRDQAALQRNGQ 197
             LS EE +  ++     P  + D G  R YP+ G   HV+GYV ++++RD  A + +  
Sbjct: 137 EDLSWEEFSRVNIRAPELPNVTADMGEVRVYPFGGAFAHVIGYVAKVSDRDLKAAEGD-- 194

Query: 198 WQNYAATKD----------IGKQGIEKFYESLLHGMPGHLEEEVNNRGRTIR--TLKSVA 245
                AT+D          IGKQG+EK ++  L G  G  + EV++ GR +R      + 
Sbjct: 195 -----ATQDQELLHHPGFRIGKQGVEKAFDKDLRGRAGATKTEVDSVGRVVRLDPAGDIP 249

Query: 246 PEPGQDIYLTLDLQLQKKAMELLAGRRGSIVAIDPRDGGILAMVSSPSYDPNQFVHGISS 305
           P  G+ I+LTLD  +Q +A+E++    G+IV +D R+G +L M S+PS+D N+FV G+S 
Sbjct: 250 PVAGKAIHLTLDADIQNRALEVMGEESGAIVVMDCRNGDLLCMASAPSFDANRFVRGLSG 309

Query: 306 KAYSDLLNARSRPLINRATQGQYAPASTVKPHMALLGLEEKVVTPKTRVWDPGFWQIPGV 365
             Y  L     +PL++++  G + P ST KP + L  L    + P+ RV  PG W   G 
Sbjct: 310 PEYKALAEYERKPLLDKSMTGLFPPGSTFKPTVGLAALAAG-IDPEVRVNCPGSWYYGG- 367

Query: 366 ERKYRDWKRWGHGWVDVNGALVHSCDTYFYDMAYKTGIDKISNFMQQFGFGERTGVDIFE 425
            R +R W++ GHG  +++ A+ +SCD YFY ++ K G D I+   +  GFG+   + I  
Sbjct: 368 -RVWRCWEKGGHGPQNMHDAIKNSCDVYFYQISLKIGPDAIARAARAVGFGQTFDIGIPG 426

Query: 426 ESAGNMPSKDWKRLKY-----NQPWYIGDTISVGIGQGYWTTTPLQLANATAIMANKGER 480
           +  G +P ++WK+  +     NQ W+ G+T S  IGQG  T   LQLA  TA +AN  + 
Sbjct: 427 QKKGIVPDREWKKRAFKRNPANQIWFPGETPSYAIGQGALTVNALQLAVMTARLANAKKA 486

Query: 481 FVPHLLKSIKNDTVKVDTPVDKMAPVVLKSPHNWQIINEAM-------RDTAHKSRFVDA 533
            VP L+KSI +    ++ P     P +  SP +   +   M       R TA+++  +  
Sbjct: 487 LVPRLIKSIGD----MERPAGSDVPDLPFSPEHLAYVRNGMAAVANDVRGTAYRNSQLGL 542

Query: 534 G-YTAAMKTGTAQVFSVAEDEKYDAENIDEHLRDNALIVAYAPYEAPRIVLAVVLENAGW 592
           G    A KTGTAQV S  +    D++++   L+D+ L VA+APY+ PR  ++V++E+ G 
Sbjct: 543 GDVQMAGKTGTAQVRSYDKGVSRDSKDVRWRLKDHNLFVAFAPYDDPRYAVSVIIEHGGL 602

Query: 593 GGANAG-PVARALLDEYMLRD 612
           GGA AG P AR ++   +L+D
Sbjct: 603 GGATAGAPRAREVMRVALLKD 623