Pairwise Alignments

Query, 210 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella loihica PV-4

Subject, 230 a.a., electron transport complex subunit E from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (337), Expect = 1e-36
 Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 8/198 (4%)

Query: 6   ELKQVLTGPIISNNPIALQILGVCSALAVTSKMETALVMTIALTAVTALSNLFISMIRNH 65
           E + ++   + +NNP  +Q+LG+C  LAV+S +  AL + IA   V   SN+ +S++R++
Sbjct: 3   ENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVRDY 62

Query: 66  IPSSVRIIVQMTIIASLVIVVDQVLQAYAYDVAKQLSVFVGLIITNCIVMGRAEAYAMKT 125
           +P  VRI V + IIASLV  V  ++ AYAY +   L +F+ LI+TNCI++GRAEA+A K 
Sbjct: 63  VPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFASKN 122

Query: 126 PPMMSFMDGIGNGLGYGAILLSVGFVRELFGNGSLF-GVEIL-------SKISEGGWYQP 177
             + + +DG   GLG  ++L+ +G +RE+ GNG+LF G ++L        +I    +   
Sbjct: 123 DVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLLGEWAKVLRIEVFHFDSA 182

Query: 178 NGLLLLPPSAFFLIASLI 195
             L LLPP AF  +  LI
Sbjct: 183 FLLALLPPGAFIGVGFLI 200