Pairwise Alignments

Query, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella loihica PV-4

Subject, 362 a.a., DNA polymerase IV from Ralstonia solanacearum IBSBF1503

 Score =  336 bits (861), Expect = 7e-97
 Identities = 172/337 (51%), Positives = 229/337 (67%), Gaps = 1/337 (0%)

Query: 1   MKKIIHVDMDCFFAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARKFGVRSAMASA 60
           ++KIIH D DCF+AA+EMRD P L G P+AVGGR +RRGV++TCNYEARKFG+ SAM  A
Sbjct: 6   VRKIIHCDCDCFYAAIEMRDDPRLVGLPLAVGGRPERRGVVATCNYEARKFGIHSAMPMA 65

Query: 61  YALKLCPDLILVPGRMSVYKEVSAQIREVFARYTELIEPLSLDEAYLDVSDCTQHQGSAT 120
            A+K CPDL+++P  M  Y++V+ QI  ++  YT L+EPLSLDEAYLDV+D T   GS T
Sbjct: 66  QAVKRCPDLVILPSAMDKYRQVARQIFAIYQSYTPLVEPLSLDEAYLDVTDSTMLAGSGT 125

Query: 121 LIAEAIRREIFEVTGLTASAGIAPVKFLAKIASDLNKPNGQYVITPQMIPEFVKTLALIK 180
            IAE IRR + E  G+T SAG+AP KF+AKIASD NKP+G +V+ P+ +  FV  L + +
Sbjct: 126 RIAEDIRRRVREEIGITVSAGVAPNKFIAKIASDWNKPDGLFVVRPEQVDAFVAALPVER 185

Query: 181 IPGVGKVTAAKLETMGLITCADVQACSRQSLMERFGKFGGVLYDRAQGIDPRGISPHRER 240
           + GVGKVTAAKL  +G  TC D++      L + FG FG  L+D  +GID R + P + R
Sbjct: 186 LFGVGKVTAAKLRRLGAQTCGDLRGWGADRLQQHFGSFGFRLHDLCRGIDHRPVQPSQIR 245

Query: 241 KSVGVETTLAKDIYTYEQCQAVMPQLIQELSGRISRSAKSRRIHKQVVKLKFDDFKQTTI 300
           KSV VE T A D+ T + C+  +  L+ +L+ R+ R+     IHK  VKL+F DF+ TT+
Sbjct: 246 KSVSVEETYATDLRTLDDCRRELTVLVDQLAARVERAHAGDMIHKTFVKLRFADFRGTTV 305

Query: 301 EQRSDEVSVKLFYDLLKQALERRAGRGIRLLGVSVGL 337
           E    +V++ +F  LL Q  ERR    +RLLGV V L
Sbjct: 306 ECVYPQVALPVFTRLLAQGFERRR-MPVRLLGVGVRL 341