Pairwise Alignments

Query, 432 a.a., acyl-CoA dehydrogenase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 416 a.a., Acyl-CoA dehydrogenases from Pseudomonas stutzeri RCH2

 Score =  434 bits (1115), Expect = e-126
 Identities = 228/397 (57%), Positives = 293/397 (73%), Gaps = 5/397 (1%)

Query: 13  MNFEFSPKVQALRERLLAFMDEHIYPNESLWEQQVEEGDRWESPAILAELKAKAKDAGLW 72
           M+F +SP+V+ALR++L AFMD+HI P    W  +V  G    S   + +LKA A+  GLW
Sbjct: 1   MDFAYSPRVEALRQQLRAFMDQHIVPRIGAWHAEVAAGQYPVS--FMDDLKALARSEGLW 58

Query: 73  NLFLPQVY-GEFSPGLTNLEYAPLAEIMGRVYWASEVFNCSAPDTGNMEVLARYGNKEQQ 131
           NLFLP +   E   GL+NLEYAPLAEIMGRV+WASEVFNC+APDTGNME+L  +   EQ+
Sbjct: 59  NLFLPSLREDEPGMGLSNLEYAPLAEIMGRVHWASEVFNCNAPDTGNMELLHMFATPEQR 118

Query: 132 ERWLQPLLNGEIRSAFSMTEPDVASSDATNVETSIVRDGDEYVINGRKWYISGACNNHTQ 191
           +RWL PLL GEIRSAF+MTEPDV SSDATN++T I RDGD+YVINGRKW+I+ A + + +
Sbjct: 119 QRWLGPLLEGEIRSAFAMTEPDVPSSDATNIQTLIRRDGDDYVINGRKWFITNASHPNCK 178

Query: 192 IHIVMGKTDPDNSNKYIQQSMILVPANTPGVKVVRPMKVFGYDDAPEGHAEVIYDNVRVP 251
           + IVMGKTDPD +  + QQSMILVP +TPGV++VR + V  +  APEGH+E++  NVRVP
Sbjct: 179 LLIVMGKTDPD-AETHQQQSMILVPFDTPGVELVRNIPVMNHI-APEGHSELLLRNVRVP 236

Query: 252 VSNMLLGEGRGFEIAQGRLGPGRIHHCMRTVGLAQRALEQMCERAETRIAFGKPLSKQQS 311
            SN+L  EG GF +AQ RLGPGRIHHCMR++G+A+ ALE M ER + R AFGK L +  +
Sbjct: 237 ASNLLGKEGDGFMMAQARLGPGRIHHCMRSIGMAELALELMVERCQERKAFGKYLQQYSN 296

Query: 312 VREAIAKSACEVEQARLLTLKAAAKMDQGGNKAAKDLIAMIKIVAPNMGCAVIDRAIQLH 371
           V + IA+S  E+EQARLL LK A  +D+ G KAA+  I+MIK + P M   V+DRAIQ++
Sbjct: 297 VADWIAESRIEIEQARLLVLKTAWMIDEVGAKAARKEISMIKALVPRMHINVVDRAIQVY 356

Query: 372 GGGGLSQDFFLAKAYTITRSIRLADGPDQVHMMQLGR 408
           G  GL+ D  LA  +T  R++R ADGPDQVH+  + R
Sbjct: 357 GAMGLTPDTPLADMWTGGRALRFADGPDQVHLRSIAR 393