Pairwise Alignments

Query, 677 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 683 a.a., GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  363 bits (931), Expect = e-104
 Identities = 215/666 (32%), Positives = 351/666 (52%), Gaps = 17/666 (2%)

Query: 7   SLTWKQTTLVVFSALFFAVAIFIVEVALVGVSARQQLMVAQEELLDSIEQPAANAVWALD 66
           SL+ K   +V+ SAL   + +   ++        Q +    + +LD    P+  AV++LD
Sbjct: 8   SLSVKLLRVVLLSALIVGMVLSCAQIVFDAYKTNQAVASDAQRILDMFRDPSTQAVYSLD 67

Query: 67  DNLATQTLEGVLKVEHVGEAVIELDDGSMFVSMNNPFTDNPLVRKLSEKLFGDLKQISRT 126
             +  Q +EG+ + E V  A I     +M      P   +   R L++ + G  +  +  
Sbjct: 68  REMGMQVIEGLFQDEAVRMASIGHPRETMLAEKTRPLQRSES-RWLTDLILGKERTFTTQ 126

Query: 127 LYRPSFFEGTEKQQIIGTLTIFYNTQELTDSLFSQLRFSFLATLARALLVTMALSIIFHR 186
           L     +      +  G L+I  +T    +         F++ + RAL + + L +++H 
Sbjct: 127 LVGRGPYS-----EYYGDLSITLDTATYGEGFIVSSVIIFISGMLRALAMGLVLYLVYHW 181

Query: 187 FLTKPIAQISEAIDKIDPELPDENLLPTSTAHQDDELGLVTSKFNQILIQFG-------Q 239
            LTKP+++I E + +I+P+ P  + +P    H+ +ELGL  +  NQ+L           +
Sbjct: 182 LLTKPLSRIIEHLTEINPDRPSAHKIPQLRGHEQNELGLWINTANQLLESIERNTHLRHE 241

Query: 240 TQSKLRRMATRDPLTGLPNRTLLLETIAVSIQRARVHKHQFTMLFIDLDRFKNVNDSLGH 299
            ++ L RMA  D LTGLPNR  L + +   +  A   + +  +L + LD FK +N+   +
Sbjct: 242 AENSLLRMAQYDFLTGLPNRQQLQQQLDKILVDAGRLQRRVAVLCVGLDDFKGINEQFSY 301

Query: 300 ALGDQFLARIARVLERVVGDRGTVARLGGDEFVILAEDARTPDQAADFVDKLLMQLNVPL 359
             GDQ L  +A  L    G  G +ARLGGD+F ++  D   P +AA+    +L  L  P 
Sbjct: 302 QTGDQLLLALADRLRAHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSILDDLEAPF 361

Query: 360 QLNEHTIHPAASVGISIYPDDGLSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAAV 419
            +++  I   A++GI+++P+DG S E L++ A+  M  AK+   N++ F+   +      
Sbjct: 362 AIDDQQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMRR 421

Query: 420 RLRTEASLHDALKNNEFLLHFQPKFNIKTGKVIACEALIRW-KKDGRLISPMSFIPVAEE 478
           R   E  L +AL   +F L +QP+ + +  +V+  EALIRW   +  L+ P  FIP+AE+
Sbjct: 422 RRELEKDLREALAREQFTLVYQPQISYRDLRVVGTEALIRWHHPEHGLVPPDLFIPLAEQ 481

Query: 479 TGIIIPLGRWVIEEACRTLKHWRKRYNYAIPIAVNVASQQFADASLVPDIKQLALRYQID 538
            G II +G WV+++ACR L+ W  +    + +AVN+++ Q     L   +  L   Y++ 
Sbjct: 482 NGTIIAIGEWVLDQACRQLRDWHDQGFVDLRMAVNLSTVQLHHTELPRVVNNLLQMYRLP 541

Query: 539 PSLLEVEITETSLMNDIELAIHKLEQLKGAGFGIAVDDFGTGYSSLSYLRHLPITTMKID 598
           P  LE+E+TET LM DI  A   L  L+ +G  IA+DDFGTGYSSLSYL+ LP+  +KID
Sbjct: 542 PRSLELEVTETGLMEDITTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKID 601

Query: 599 RCFVTDL---PNESAIASTILMLGKQLNLHIVAEGIENEQQLNWLKQMDCEIGQGFYYSQ 655
           + FV DL    +++ I   I+ LGK L + ++AEG+E  +Q  ++    C  GQG+YYS+
Sbjct: 602 KSFVQDLLDDEDDATIVRAIIQLGKSLGMQVIAEGVETVEQEAYIIAEGCHEGQGYYYSK 661

Query: 656 PLDISE 661
           PL   E
Sbjct: 662 PLPARE 667