Pairwise Alignments

Query, 308 a.a., alpha/beta hydrolase fold (RefSeq) from Shewanella loihica PV-4

Subject, 328 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  418 bits (1074), Expect = e-121
 Identities = 204/306 (66%), Positives = 232/306 (75%), Gaps = 13/306 (4%)

Query: 9   QESRFIPYRQGQLHLRLLKRPDADMSRPPILMLHGAMSNGRVFYSDKGRGLGCYLAEAGF 68
           Q S ++PYR G+LHLR L     D S+PPILMLHGAMSNGRVFYS  GRGLGC+LA AGF
Sbjct: 17  QTSLYLPYRDGELHLRQLLPAIVDFSKPPILMLHGAMSNGRVFYSQSGRGLGCFLANAGF 76

Query: 69  VVYVLDTLGRGLSTPKLSTGASHGQGEVIREQLPLVQHYILSQHPEA---------HKVH 119
           VVYVLDT GRGLS PK+S   + GQGEVIREQLPLVQ Y+L+ H +           +VH
Sbjct: 77  VVYVLDTAGRGLSLPKISRDFTLGQGEVIREQLPLVQQYVLAIHKQVCEEQGKSSPSQVH 136

Query: 120 WCAHSWGGVLMASAIARFDFFQTSVASLLTFGSKRAIKVRSLKKWLMVDLVWNKLAPAIA 179
           WCAHSWGGVLMASA+AR+   Q SV SLLTFGSKR I+V+S KKWLMVD+ WN+LAP +A
Sbjct: 137 WCAHSWGGVLMASALARYPELQQSVRSLLTFGSKRTIRVKSFKKWLMVDVFWNRLAPGLA 196

Query: 180 AGHGYLAADRWRMGMDNETRASLSQSIDWVRGEWIDHDDGFDYAKAAIALGAKQGWPKSW 239
            G GYLAAD+ R+GMDNE+RASL+QSIDWVRGEW DHDDGFDYAKAA        WP +W
Sbjct: 197 VGQGYLAADKLRVGMDNESRASLNQSIDWVRGEWRDHDDGFDYAKAA----NMAKWPSAW 252

Query: 240 FIAGKGDQVLGNPADVQRMIKECHIKPVTYTLLSKANGNRHDYGHAEMLTHKDATEDHFP 299
           FIAG+ D VLG+P DV  MI EC    V YTLLSK NG +HDYGHA+MLTH DA  DHFP
Sbjct: 253 FIAGQNDTVLGHPEDVADMINECGFSQVKYTLLSKENGFKHDYGHADMLTHLDAMNDHFP 312

Query: 300 QVLSWY 305
            +  WY
Sbjct: 313 LIRDWY 318