Pairwise Alignments

Query, 457 a.a., DNA repair protein RadA (RefSeq) from Shewanella loihica PV-4

Subject, 487 a.a., DNA repair protein RadA from Sinorhizobium meliloti 1021

 Score =  286 bits (733), Expect = 8e-82
 Identities = 164/444 (36%), Positives = 247/444 (55%), Gaps = 10/444 (2%)

Query: 1   MAKNKTAYVCSECGQDFPRWQGQCNACGEWNTISEVRLAPAKSSAGSVAGYAGAVGGGSK 60
           MAK +T +VC  CG    RW G+C+ CGEWNTI E                 G     + 
Sbjct: 21  MAKARTQFVCQNCGTVHSRWVGKCDGCGEWNTIIEDNPTAGIGGGPMRTPKKGRPVALTT 80

Query: 61  KLSEVEEFEAKKLLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQLMP 120
              E+E+  A ++ TGI ELDRV  GG   GS  ++ GDPG GK+T+L    + +++   
Sbjct: 81  LSGEIED--APRIQTGISELDRVTGGGFVRGSALLVGGDPGIGKSTVLMQAAAALARRKH 138

Query: 121 S-LYCTAEESLSQFKNRVNRLRLDCNEENLYLMAETNVEAIIAEL-EAKQVKFAVIDSIQ 178
             +Y + EE+++Q + R  RL     + ++ L AETNVE I+A L E K+    +IDSIQ
Sbjct: 139 RVIYVSGEEAIAQVRLRAQRL--GAADSDVLLAAETNVEDILATLSEGKRPDLVIIDSIQ 196

Query: 179 AVVTDLANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCL 238
            + +D+ + +PG+ +QV+   QA+ ++ KQ    + LV HV K  + AGP+ + H+VD +
Sbjct: 197 TLWSDIVDSAPGTVTQVRTGVQAMIRFAKQTGTAVVLVGHVTKEGQIAGPRVVEHMVDAV 256

Query: 239 THLECNDGQ-VRTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSTTESPGAAI 297
            + E + G   R LR  KNRFG  D +G+F M+++G+  V NPSE+FL     +SPGAA+
Sbjct: 257 LYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGERNAKSPGAAV 316

Query: 298 TCIRKGNRNLLLEIQCLTTEAEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKI-YHDTYF 356
               +G R +L+E+Q L        P+R  VG +  R+ M+  +L  H   ++  HD Y 
Sbjct: 317 FAGMEGTRPVLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCGIRLGQHDVYL 376

Query: 357 NLVGGLKIDESETCIDLALVAALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKE 416
           N+ GG +I  SE   DLA+ +AL+SSL    +P      GE+SL+G VRP+     R+KE
Sbjct: 377 NVAGGYRI--SEPAADLAVASALVSSLAGLALPPDCVYFGEVSLSGAVRPVAHTAQRLKE 434

Query: 417 AVQHGFTEIFIPFRNYHKSMEGLG 440
           A + GF++  +P  +      G G
Sbjct: 435 AEKLGFSQAVLPSASTELPKNGNG 458