Pairwise Alignments

Query, 457 a.a., DNA repair protein RadA (RefSeq) from Shewanella loihica PV-4

Subject, 454 a.a., DNA repair protein RadA from Phaeobacter inhibens DSM 17395

 Score =  294 bits (753), Expect = 4e-84
 Identities = 172/443 (38%), Positives = 252/443 (56%), Gaps = 12/443 (2%)

Query: 5   KTAYVCSECGQDFPRWQGQCNACGEWNTISEVRLAPAKSSAGSVAGYAGAVGGGSKKLSE 64
           KT Y CS CG  F +W G+C+ CGEWN+I+E +     S  G  +   G   G +  LS+
Sbjct: 3   KTTYSCSACGASFSKWSGRCDGCGEWNSITEDK---GLSKGGPASKSLGMRRGKTIPLSD 59

Query: 65  V--EEFEAKKLLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQL-MPS 121
           +  EE    +   G+GELDRVL GGL   S  ++ GDPG GK+T+L    ++ +Q  + +
Sbjct: 60  LATEEAPPPRTCCGVGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAAAQFAQSGLKT 119

Query: 122 LYCTAEESLSQFKNRVNRLRLDCNEENLYLMAETNVEAIIAELEAKQVKFAVIDSIQAVV 181
           +Y + EE+ +Q + R  RL L   E  + L AETN+  I+  LEA++ + A+IDSIQ + 
Sbjct: 120 IYVSGEEASAQVRMRAQRLGLA--EAPVKLAAETNLRDILTTLEAERPQLAIIDSIQTMW 177

Query: 182 TDLANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTHL 241
            D  + +PGS SQV+ +A  LT + K N V++ +V HV K  + AGP+ + H+VD + + 
Sbjct: 178 ADHVDSAPGSVSQVRAAAHELTTFAKTNGVSIIMVGHVTKEGQIAGPRVVEHMVDTVLYF 237

Query: 242 ECNDG-QVRTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSTTESPGAAITCI 300
           E   G Q R LRA KNRFG  D +G+F MT  G+  V NPS +FLS   T SPG+ +   
Sbjct: 238 EGERGHQFRILRAVKNRFGPADEIGVFEMTGGGLSEVRNPSALFLSERGTPSPGSVVFSG 297

Query: 301 RKGNRNLLLEIQCLTTEAEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIYH-DTYFNLV 359
            +G R +L+E+Q L   +    P+R  VG + +R+ M+  +L           D Y N+ 
Sbjct: 298 IEGTRPVLVEMQALVAPSPHSQPRRAVVGWDSSRLAMILAVLEARCGIPFAGLDVYLNVA 357

Query: 360 GGLKIDESETCIDLALVAALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQ 419
           GG+KI  SE   DLA+ AALLS+  +  +P  T + GE+SL+G +RP      R+KEA +
Sbjct: 358 GGMKI--SEPAADLAVAAALLSAREDTALPADTVVFGEISLSGALRPAPQTENRLKEAQK 415

Query: 420 HGFTEIFIPFRNYHKSMEGLGAK 442
            GFT    P      ++ GL  +
Sbjct: 416 LGFTAAIAPSGGKSVAVPGLAVR 438