Pairwise Alignments

Query, 457 a.a., DNA repair protein RadA (RefSeq) from Shewanella loihica PV-4

Subject, 455 a.a., DNA repair protein RadA from Phocaeicola vulgatus CL09T03C04

 Score =  275 bits (702), Expect = 3e-78
 Identities = 159/454 (35%), Positives = 251/454 (55%), Gaps = 9/454 (1%)

Query: 1   MAKNKTAYVCSECGQDFPRWQGQCNACGEWNTISEVRLAPAKSSAGSVAGYAGAVGGGSK 60
           MAK KT YVC+ CGQD P+W G+C +CG WNT  E  +    ++   V+G   +V     
Sbjct: 1   MAKEKTVYVCTNCGQDSPKWVGKCPSCGAWNTYVEEIIRKEPANKRPVSGLE-SVKSKPV 59

Query: 61  KLSEVEEFEAKKLLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQLMP 120
            L+++   +  ++     EL+RVL GGL  GS+ ++ G+PG GK+T++   V  +     
Sbjct: 60  TLNDITGGDEPRIDMHDEELNRVLGGGLVPGSLVLLGGEPGIGKSTLVLQTVLHLPD-KK 118

Query: 121 SLYCTAEESLSQFKNRVNRLRLDCNEENLYLMAETNVEAIIAELEAKQVKFAVIDSIQAV 180
            LY + EES  Q K R +R+    N  +  ++ ET++E I   ++  Q    +IDSIQ +
Sbjct: 119 VLYISGEESARQLKLRADRI--PHNSSDCLIVCETSLEQIYVHIKNTQPDLVIIDSIQTI 176

Query: 181 VTDLANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH 240
            T+  + SPGS  QV+  + ++ ++ K+ N  + L+ H+NK    AGP+ L HIVD +  
Sbjct: 177 STETIDSSPGSLVQVRECSASILKFAKETNTPVILIGHINKEGSIAGPKVLEHIVDTVLQ 236

Query: 241 LECNDGQV-RTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSTTESPGAAITC 299
            E +   + R LR+ KNRFG    +GI+ M + G+  V NPSE+ LS       G AI  
Sbjct: 237 FEGDQHYMYRILRSIKNRFGSTAELGIYEMRQNGLRQVSNPSELLLSQDHDGMSGVAIAS 296

Query: 300 IRKGNRNLLLEIQCLTTEAEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKI-YHDTYFNL 358
             +G R  L+E Q L + A    PQR   G ++ R+ ML  +L K    K+   D + N+
Sbjct: 297 AIEGVRPFLIETQALVSSAVYGNPQRSATGFDLRRMNMLLAVLEKRVGFKLAQKDVFLNI 356

Query: 359 VGGLKIDESETCIDLALVAALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAV 418
            GGLK+  ++  IDL++++A+LSS  +  + R TC+ GE+ L+G++RP++    R+ EA 
Sbjct: 357 AGGLKV--NDPAIDLSVISAILSSNMDTEIERDTCMAGEVGLSGEIRPVNRIEQRIGEAE 414

Query: 419 QHGFTEIFIPFRNYH-KSMEGLGAKINPIKTIHE 451
           + GF +I IP  N        L  +I P++ + E
Sbjct: 415 KLGFKQILIPKHNLQGMDTSKLKIEIIPVRKVEE 448