Pairwise Alignments

Query, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score =  377 bits (969), Expect = e-109
 Identities = 204/410 (49%), Positives = 279/410 (68%), Gaps = 3/410 (0%)

Query: 1   MLFSQLSLPAPLQQALEALAFSEATQIQAEAIPLVLSGVDLMASAQTGTGKTAAFALPIL 60
           M F  L L   + +A+    + E T IQ +AIP VL G DLMASAQTGTGKTA F LP+L
Sbjct: 1   MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  AKLMGLAQAEGSDKQPRALVLVPTRELALQVHQGISDFARFTSLSAGLVYGGVSIEAQCQ 120
             L+         +  RAL+L PTRELA Q+ + + D++++ ++ + +V+GGVSI  Q  
Sbjct: 61  QHLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM 120

Query: 121 QLAAGVDLIVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELMALLPSE 180
           +L +GVD++VATPGRLLDL  + A  LD V  LV DEADRMLDMGF  +I  ++A LP++
Sbjct: 121 KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK 180

Query: 181 RQTLLFSATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHLI 240
           RQ LLFSAT  D++ +L+ + L  P  I V+ +N+AS+ V Q V+ VD +RK  LLS +I
Sbjct: 181 RQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQMI 240

Query: 241 NKGDWQRVLVFSRKKVAADKLAARLCEQGIMAKAFHGDLGQGAREQVLADFRRGEIKVLV 300
            +G+WQ+VLVF+R K  A+ LA +L + GI + A HG+  QGAR + LADF+ G I+VLV
Sbjct: 241 GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV 300

Query: 301 ATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRAGKQGVAVTLYCEEDALLLEEI 360
           ATD+AARG+DIE L +VVNYELP V +DYVHRIGRTGRA   G A++L C ++  LL +I
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI 360

Query: 361 EALLDKRLPQQWLPGFEPDLT-KADP--NPRRNGKAAQKRRAKRRGQGGR 407
           E LL K +P+  L G+EPD + KA+P  N R+  +    R  + +G+GG+
Sbjct: 361 ERLLKKEIPRIALAGYEPDPSIKAEPIQNGRQQQRGGGGRGGQSQGRGGQ 410