Pairwise Alignments

Query, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  496 bits (1277), Expect = e-144
 Identities = 261/683 (38%), Positives = 402/683 (58%), Gaps = 14/683 (2%)

Query: 317  EHKRADMAMRTSQERLALVLESSDLGMWDWDIKSNE---TKRNPWCAKVLGCDLERLNRD 373
            + +  + ++RTS+ERL L L +S  GMWDWDI S +   T+ +P   + L         +
Sbjct: 808  QRREFETSIRTSEERLKLALWASGDGMWDWDIPSGQVFRTRMHPHTEQQL---------N 858

Query: 374  SRIWIDAIHPQDRMAVLNSIDRHLKGETQKHYIEYRLISLSGEEHWILDTGKVVSRDRNG 433
              + +D IHP+D+  VL++I++H+ G    +  EYR+ +  G   WI D GKVV RD+ G
Sbjct: 859  GPVLLDRIHPEDKPRVLHAIEQHIDGSRAFYEAEYRIENKPGHWIWITDRGKVVERDKQG 918

Query: 434  LPTRMCGVHSDITEQKKVQESLELAASVYNNSSEAMSVQDHKGHIITINAAFTAITGYSQ 493
             P RM G H DIT +K  +  L L+A V  + +EA+ V      I ++N AF+ ITG++ 
Sbjct: 919  KPVRMVGTHKDITSRKNAENELRLSAQVLASMNEAVVVGGLDYRIASVNPAFSLITGFNP 978

Query: 494  EEALTQNIRILQSSRTPRSQYDEMNSAIRDTGYWQGELWIKNKSGEEYMVWLTINTIFDQ 553
            E+   ++   L   R  R  Y+ +   +    +W GEL I+ +     ++WL IN + D 
Sbjct: 979  EQVQGKHFLFLTHDRKQRHIYEAIEQQLLRNKHWAGELKIRTRDQRAILIWLEINQVLDS 1038

Query: 554  HGQVYRRVALFSDITEKKEAEHIIWKQANYDPLTGLPNRRMLLEYLNTEILRIDRNHSHF 613
              +    VA+F+DIT++K+AE  +   A+YDPLT LPNR +  + L+  + +  R  +  
Sbjct: 1039 KAEASHFVAVFTDITDRKKAEEDLRLLASYDPLTNLPNRTLFQDRLDHALAQAHRTGNMV 1098

Query: 614  ALMFLDLDFFKEVNDTLGHDMGDLLLQETAKRLKGCIRESDVVARLGGDEFTVVLSGIDS 673
            AL+FLDLD FK +ND++GH +GDLLL+  A RL+ C+RE D VARLGGDEFT++L G+  
Sbjct: 1099 ALLFLDLDRFKHINDSMGHHIGDLLLKAVAHRLQNCVREGDTVARLGGDEFTIILEGVAK 1158

Query: 674  PSGVERVAQSILERIAEPYSLGDETAYISASIGITIYPDDATSIEGLLKHADQAMYAAKE 733
                  +A+ ++     P+ L D+   IS SIGI++YP DA+    L+K+AD AMY AK 
Sbjct: 1159 TKAATVIAEKLIRAFQTPFILEDQALNISPSIGISLYPMDASDSTSLVKYADTAMYHAKS 1218

Query: 734  QGRNRFHYFTPSMQEYARYRMALIKDLRNAINRKEFELFYQPIVDMNKLGVYKAEALIRW 793
             GRN F ++T  + EYA   + L   ++ AI R+E  L +QP   ++   +   EAL+RW
Sbjct: 1219 LGRNNFQFYTLRLNEYAMRHVQLEAGIKQAIVRQELSLVFQPKFRVSDGSITGFEALLRW 1278

Query: 794  VHPQRGLVSPGEFIPVAEETGLINEIGNWVFEKAAQQSARWRTQHGVEIQISINKSPIQF 853
               + G +SP EFIP+AEE G+IN++G+WV  +A +  A++      ++ +++N S  Q 
Sbjct: 1279 NSKELGPISPAEFIPLAEEIGIINQLGHWVVNEACRHMAQFAAAGFDDLHVAVNLSARQL 1338

Query: 854  RDEGDTFSDWLALLRHLELSSNAICVEITEGLLLDASMGVTDKLLAYRDAGIQVSLDDFG 913
            +   D  S     L    L +  + +E+TE +++ +       L   +  G+ +++DDFG
Sbjct: 1339 K--ADILSTIEVALAVAGLPAKCLELELTESMIMKSPQESVAVLQRLKALGVSLAVDDFG 1396

Query: 914  TGYSSLAYLKKFDIDYLKIDQSFTRNLESDSDGVALCEAIIVMAHKLGIKVIAEGVETQF 973
            TGYSSLAYLK+F +D LKID+ F R++ +D D  A+  AII +AH L + V+AEGVE + 
Sbjct: 1397 TGYSSLAYLKRFPLDTLKIDREFVRDISTDPDDAAITGAIIALAHSLELNVVAEGVENEA 1456

Query: 974  QHDILASAGCDFAQGYLYSKPVS 996
            Q + L   GCD  QG+L  KP++
Sbjct: 1457 QLEHLRKHGCDQVQGFLLGKPMA 1479