Pairwise Alignments

Query, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

Subject, 1283 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Pseudomonas fluorescens SBW25-INTG

 Score =  445 bits (1144), Expect = e-128
 Identities = 277/809 (34%), Positives = 428/809 (52%), Gaps = 29/809 (3%)

Query: 222  VDQHWIKVNPRLCKMLKYSETELLNRT---WTELTYFEDLKA--DMTQFQRMLKGEIDAY 276
            + Q  I  N  L   L Y++ EL       W  L + ED +   D+ Q QR + G     
Sbjct: 473  ISQRMIFSNHHLGHTLGYNKAELQQMGEYFWEILLHPEDAEHYHDLRQQQRQV-GYTTQL 531

Query: 277  EMDKRFVAKDGEIVYTHLT--VACRRNHNMVDMVIAGLIDITEHKRADMAMRTSQERLAL 334
            +   RF  ++ +     +      R     +  +I    DIT+   A  ++R S++R  +
Sbjct: 532  QCQLRFRHRNNQWRRFDIREQALARDKSAQITRIIGVAKDITDQIEASESLRDSEQRYRM 591

Query: 335  VLESSDLGMWDWDIKSNETKRNPWCAKVLGCDLERLNRDSRIWIDAI-HPQDRMAVLNSI 393
            + ES    +   D +      +P    VLG D++ + ++   W   I +PQ    + + +
Sbjct: 592  LAESISDVICSTDSQLALNYISPSVNAVLGYDVDWVFKNG--WQSIIANPQQLTGIYSLV 649

Query: 394  DR------------HLKGETQKHYIEYRLISLSGEEHWILDTGKVVSRDRNGLPTRMCGV 441
            ++             L+ E Q     +  +   G +  I +   V+  D +G    + GV
Sbjct: 650  EQVSRALGDIEALNKLRDEIQTQLFLFDCLRADGRKVPI-ELRLVLVWDEHGAFEGILGV 708

Query: 442  HSDITEQKKVQESLELAASVYNNSSEAMSVQDHKGHIITINAAFTAITGYSQEEALTQNI 501
              DI++Q++ ++ L +AA+V+ +S+ A+ + D  G+I+  N AF+ ++GY   + L Q  
Sbjct: 709  GRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYEVSDVLDQLP 768

Query: 502  RILQSSRTPRSQYDEMNSAIRDTGYWQGELWIKNKSGEEYMVWLTINTIFDQHGQVYRRV 561
             +L       +    +   +     W+GE+W+K ++GE Y  W+ I  +FD  G +   V
Sbjct: 769  NMLTVDEQQEAHLRYVLKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVFDDEGDLASYV 828

Query: 562  ALFSDITEKKEAEHIIWKQANYDPLTGLPNRRMLLEYLNTEILRIDRNHSHFALMFLDLD 621
              FSDI+E+K +E  I + A YD LT LPNR +  + L+T +   +R  S   LMFLDLD
Sbjct: 829  CFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLD 888

Query: 622  FFKEVNDTLGHDMGDLLLQETAKRLKGCIRESDVVARLGGDEFTVVLS-GIDSPSGVER- 679
             FK +ND+LGH  GD +L+E A RL GC+ E D VAR+GGDEFT++L   I     + R 
Sbjct: 889  RFKPINDSLGHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRISREMALNRA 948

Query: 680  --VAQSILERIAEPYSLGDETAYISASIGITIYPDDATSIEGLLKHADQAMYAAKEQGRN 737
              VA+ IL  + +P+ L     +++ASIGI + P D   +  L+K+AD AMY AKE+G+N
Sbjct: 949  IHVAEQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKN 1008

Query: 738  RFHYFTPSMQEYARYRMALIKDLRNAINRKEFELFYQPIVDMNKLGVYKAEALIRWVHPQ 797
             F ++   M   A  R+ L  DLR+A+++ EF L+YQP    +   +  AEAL+RW HP+
Sbjct: 1009 NFQFYQADMNASALERLELESDLRHALDQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPR 1068

Query: 798  RGLVSPGEFIPVAEETGLINEIGNWVFEKAAQQSARWRTQHGVEIQISINKSPIQFRDEG 857
            RGLV PG+FIPV EE GL+ ++G+WV  +A +Q   W        ++S+N S  QF D G
Sbjct: 1069 RGLVPPGDFIPVLEELGLVVDVGDWVISEACRQLKTWHQNKVRVPKVSVNISARQFSD-G 1127

Query: 858  DTFSDWLALLRHLELSSNAICVEITEGLLLDASMGVTDKLLAYRDAGIQVSLDDFGTGYS 917
               +    +L+   L    + +E+TE +L+         L + ++ G+ +++DDFGTGYS
Sbjct: 1128 QLGTRIATILKDTGLPPACLELELTESILMREVNEALHILDSLKNLGLSIAVDDFGTGYS 1187

Query: 918  SLAYLKKFDIDYLKIDQSFTRNLESDSDGVALCEAIIVMAHKLGIKVIAEGVETQFQHDI 977
            SL YLK+F ID LKID++F   L S      +  AII MAH L + VIAEGVET  Q D 
Sbjct: 1188 SLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDF 1247

Query: 978  LASAGCDFAQGYLYSKPVSLPEFERLYVN 1006
            L   GCD  QGYL+ +P+    FE  + N
Sbjct: 1248 LREHGCDEVQGYLFGRPMPANRFEAQFSN 1276