Pairwise Alignments

Query, 456 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

Subject, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  240 bits (613), Expect = 6e-68
 Identities = 135/441 (30%), Positives = 232/441 (52%), Gaps = 9/441 (2%)

Query: 16  LATAPIPKLVWRYAIPTILSMVVTGVYVAIDGMFVGHYLGEVGLAGMMLAYPVGAILYAV 75
           L    I  L+ RY IP+I   V+ G+Y  IDG+F+G  +G  GLAG+  ++PV   + ++
Sbjct: 7   LENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVLIAISSI 66

Query: 76  GALIGMGAASLVSINLGLKDVARARHLLGNAFTLCLLAGTGLALLGTRWSQTILIWLGAE 135
           G +IG G+++++SI+LG KD  +A  +L  A T  +L    +   G      ++ ++   
Sbjct: 67  GVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLS 126

Query: 136 GEVLTSAEQYLFWYFAL----GVFPVLAIAFTALLRNDGRPGFVTLVLILSGCLNVLLDW 191
             +    E Y+  Y  +     +  + AI+   +LRNDG P    ++L L    N++LD+
Sbjct: 127 KNL----ESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIILDY 182

Query: 192 LLIVVFPYGLAGAAIATMICQAFTALACLQHFFTKRTRLGINWQQMRLNLDHCSNILRVG 251
           +LIVVF +G+ GAA AT++ Q   ++  L+HF + ++ + I      L       I + G
Sbjct: 183 MLIVVFNFGVMGAAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSLIKRIAKTG 242

Query: 252 VPSFLMNLYLSIVLTLHNMAFLWVGGPIHVAAYGVVSYAEALFYLIFEGIAFGTQPLFSF 311
              F+M L   I++ +HN+ F+  G  + V+AYG+V Y  +  Y+++ GI+ G QPL S+
Sbjct: 243 FSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEGVQPLISY 302

Query: 312 NTGAKRFDRVFETLRLVIIMTLVTALAGVVFIYWAPEYLVYIFAGDNSELAPVAIEGMRL 371
           N GAK+F+RVFE L+  + +  +  +   + I   P  L+ IF   ++ L      G+ +
Sbjct: 303 NHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDTNLIATTTIGLEI 362

Query: 372 YFWGLPFEGLILVGAAFFQAINRPKEASILT-GSKLVLIAMVLYLFAWLFGVTGVWISLA 430
           + + +   G+ +V   +F A  +PK A  L+ G  L+ I   + L     G+ G+W +  
Sbjct: 363 HNFAILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLPIYLGIKGIWWATV 422

Query: 431 SCSLLLTIWMVYTLTKLSKKL 451
               L  I  +Y +TK  KK+
Sbjct: 423 FSEYLSFIITIYFITKEFKKI 443