Pairwise Alignments

Query, 335 a.a., isocitrate dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

 Score =  265 bits (678), Expect = 9e-76
 Identities = 144/337 (42%), Positives = 217/337 (64%), Gaps = 17/337 (5%)

Query: 6   ITVIPGDGIGPSIIDSAIKILDKAGCDFEYEFADAGLAALEKQGELLPQRTLDMIEKNRI 65
           I VI GDGIG  ++   +++L++ G DFE+  A AG    ++ G+ +P+ T+++ +++  
Sbjct: 7   ICVINGDGIGNEVVPETVRVLNELG-DFEFIHAHAGYECFKRCGDAIPENTIEIAKESDC 65

Query: 66  TLKGPLTTPV-----GEGFTSINVTLRKKFGLYANVRPVLSFKGTQARYDNIDIITVREN 120
            L G +TTP       + + S  +TLRK+  LYAN+RP  +F       DN+D + +REN
Sbjct: 66  ILFGSVTTPKPTELKNKSYRSPILTLRKELDLYANIRPTYNF-------DNLDFVIIREN 118

Query: 121 TEGMYSGLGQTVSEDGATAEATSIITRQGAEQITTFAYELARKEGRKKVTIVHKANIMKS 180
           TEG+Y    +   E    A A  II++ G+ +I  FA++ A +  RKKV+ +HKAN+++ 
Sbjct: 119 TEGLYVKK-EYYDEKNEVAIAERIISKFGSSRIVKFAFDYAVQNNRKKVSCIHKANVLRV 177

Query: 181 TSGLFLKVAREVSQRYPD--ITTEEMIVDATCMKLVMNPENFDVIVTTNLFGDILSDLCA 238
           T GLFL+V  E+S+ Y    I +++ ++DAT M L+ NP+ FDV+VTTNLFGDILSD  A
Sbjct: 178 TDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMFDVLVTTNLFGDILSDEAA 237

Query: 239 GLVGGLGMAPGANIGKNAAIFEAVHGSAPDIAGKNLANPTSVILASIQMLEYLGMSDKAQ 298
           GL+GGLGM+P ANIG    +FE VHGSAPDIAGK ++NP + IL++  ML++L M+ +A+
Sbjct: 238 GLIGGLGMSPSANIGDKNGLFEPVHGSAPDIAGKGISNPIATILSAAMMLDHLKMNKEAE 297

Query: 299 AIRAAVSAVIEEGDRTTRDLGGTHGTSDFTQAVLERL 335
            IR AV   + E    T DLGG   T + T+ ++E +
Sbjct: 298 YIRKAVKKTV-ECKYLTPDLGGNLKTFEVTEKIIESI 333