Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 914 a.a., DNA polymerase I from Pseudomonas stutzeri RCH2

 Score =  113 bits (283), Expect = 1e-29
 Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 15/257 (5%)

Query: 5   LIIDGLN-LVRRIHAAQPNENDVNGLPERVTSACRKLLS---KHNPSHVTLVWDGDAISW 60
           +++DG + L R  HA  P           V      LLS   ++  S   +V+D    ++
Sbjct: 7   ILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFDAKGPTF 66

Query: 61  RKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAIA-EADDVIATLASKMVQAK 119
           R  L+++YK  R PMP+ L   +  L   +   G   +     EADDVI TLA +   A 
Sbjct: 67  RDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLA-RQCAAL 125

Query: 120 GEAIIVST-DKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGDSGN 178
           G  +++ST DK   QL+ P + L +        IE  + + GV     IDFLA+ GD  +
Sbjct: 126 GRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKTKFGVGPELIIDFLALMGDKVD 185

Query: 179 KIPGIPGIGPKSACELLKTF-RTLANVYASLDKI------GAKQ-AKKLEEGRALARLSY 230
            IPG+PG+G K+AC LL      L  +Y +LD++      GAK    KL E R  A +SY
Sbjct: 186 NIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDAAFMSY 245

Query: 231 KLVQLQTDIPLNTRLAN 247
           +L  ++ D+PL+  + +
Sbjct: 246 ELATIKIDVPLDVEVGD 262