Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 924 a.a., DNA polymerase A (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (288), Expect = 3e-30
 Identities = 77/250 (30%), Positives = 134/250 (53%), Gaps = 8/250 (3%)

Query: 6   IIDGLNLVRRIHAAQPNENDVNGLPERV----TSACRKLLSKHNPSHVTLVWDGDAISWR 61
           ++DG   + R + + P     +G P       T+   KLL+  +  H+ +++D   +S+R
Sbjct: 9   LVDGSGYIFRAYHSLPPMTRTDGTPVNAVYGFTAMLMKLLADMDADHLAVIFDKARVSFR 68

Query: 62  KKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAIA-EADDVIATLASKMVQAKG 120
            ++Y  YK  R P PE L    P +++ +       I+    EADD+IAT A K  +A+G
Sbjct: 69  NEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYA-KRARAEG 127

Query: 121 EAI-IVSTDKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGDSGNK 179
             + +VS+DK   QL+   + L+D    +AI   +   + GV   + ID  A+AGD+ + 
Sbjct: 128 AIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAEVFEKFGVAPDKVIDVQALAGDAVDN 187

Query: 180 IPGIPGIGPKSACELLKTFRTLANVYASLDKI-GAKQAKKLEEGRALARLSYKLVQLQTD 238
           +PG+PGIG K+A +L+  +  L  + A   +I   K+ + L +    AR+S +LV+L+ D
Sbjct: 188 VPGVPGIGVKTAAQLIGEYGDLETLLARAAEIKQPKRRQSLLDHAEAARISLQLVRLRDD 247

Query: 239 IPLNTRLANF 248
           + ++  LA+F
Sbjct: 248 VEVSETLADF 257