Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 937 a.a., DNA polymerase I from Phaeobacter inhibens DSM 17395

 Score =  114 bits (286), Expect = 6e-30
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 25/263 (9%)

Query: 6   IIDGLNLV-RRIHAAQPNENDVNGLPERVTSACRKLLSKH--------NPSHVTLVWDGD 56
           +IDG   + R  HA  P     +GLP    +    +L ++         P+HV +++D  
Sbjct: 14  LIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGPDAPTHVAVIFDKG 73

Query: 57  AISWRKKLYDDYKKGRKPMPEALSQALPALKQHLA--------ERGFHSIDAIAEADDVI 108
           + ++R  LYD YK  R+ MPE L   +P  +            + GF       EADD+I
Sbjct: 74  SHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGF-------EADDII 126

Query: 109 ATLASKMVQAKGEAIIVSTDKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFID 168
           ATLA +   A G   I+S+DK   QL+   +++ D    + I  +    + GV   + +D
Sbjct: 127 ATLACQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDTDGVFEKFGVGPDRVVD 186

Query: 169 FLAMAGDSGNKIPGIPGIGPKSACELLKTFRTLANVYASLDKI-GAKQAKKLEEGRALAR 227
             A+AGDS + +PG PGIG K+A  L+  + +L ++    ++I   K+ + L E RA   
Sbjct: 187 VQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEDLLNRAEEIKQPKRRQTLIENRAQIE 246

Query: 228 LSYKLVQLQTDIPLNTRLANFRV 250
           LS +LVQL  ++ L+  L +  V
Sbjct: 247 LSKQLVQLDNNMELDFTLDDLGV 269