Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 251 a.a., flap endonuclease Xni from Klebsiella michiganensis M5al

 Score =  174 bits (441), Expect = 2e-48
 Identities = 104/251 (41%), Positives = 145/251 (57%), Gaps = 12/251 (4%)

Query: 5   LIIDGLNLVRRIHAAQPNENDVNGLP--ERVTSACRKLLSKHNPSHVTLVWDGD--AISW 60
           LI+D LNL+RRIHA Q       G P  +    A  +L+    P+HV  V+D +     W
Sbjct: 6   LIVDALNLIRRIHAVQ-------GSPCVDTCLHALEQLVVHSQPTHVVAVFDDEDRGHGW 58

Query: 61  RKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAI-AEADDVIATLASKMVQAK 119
           R +   DYK GR PMPE L   +PAL+     RGF       +EADD+ ATLA K+ QA 
Sbjct: 59  RHQRLPDYKAGRAPMPETLEAEMPALRAAFELRGFRCWALSGSEADDLAATLAVKVAQAG 118

Query: 120 GEAIIVSTDKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGDSGNK 179
            +A IVSTDKG+ QLLSP I++ D+F ++ +      ++ GV   Q  D+  +AG S +K
Sbjct: 119 HQATIVSTDKGYCQLLSPTIRIRDYFQKRWLDAPFIAKEFGVTPEQLPDYWGLAGISSSK 178

Query: 180 IPGIPGIGPKSACELLKTFRTLANVYASLDKIGAKQAKKLEEGRALARLSYKLVQLQTDI 239
           +PG+ GIGPKSA +LL  F+ L  +YA L  +  K  KKLEE + +A    ++ +LQTD+
Sbjct: 179 VPGVAGIGPKSAAQLLTDFQDLEGIYARLADVPEKWRKKLEEQQEMAFTCREIARLQTDL 238

Query: 240 PLNTRLANFRV 250
            L+  L   R+
Sbjct: 239 QLDGNLQQLRL 249