Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  118 bits (296), Expect = 4e-31
 Identities = 83/261 (31%), Positives = 134/261 (51%), Gaps = 22/261 (8%)

Query: 6   IIDGLNLV-RRIHAAQPNENDVNGLPERVTSACRKLLSKH-------NPSHVTLVWDGDA 57
           +IDG   + R  HA  P     +GLP    S    +L ++       + +HV +++D  +
Sbjct: 11  LIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVAVIFDKGS 70

Query: 58  ISWRKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFH----SIDAIAEADDVIATLAS 113
            ++R  LYD YK  R+ MPE L   +P  +   A   F+     ++   EADD+IATLA 
Sbjct: 71  HTFRNDLYDQYKANREAMPEDLRPQIPLTRT--ATEAFNIACKEMEGF-EADDIIATLAC 127

Query: 114 KMVQAKGEAIIVSTDKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMA 173
           +  +A G   I+S+DK   QL+   +++ D    + I ++    + GV   + +D  A+A
Sbjct: 128 QAREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVVDVQALA 187

Query: 174 GDSGNKIPGIPGIGPKSACELLKTFRTLANVYASLDKIG----AKQAKKLEEGRALARLS 229
           GDS + +PG PGIG K+A  L+  + +L  +   LD+ G     K+ + L E RA   LS
Sbjct: 188 GDSVDNVPGAPGIGIKTAALLINEYGSLEEL---LDRAGEIKQPKRRQTLIEHRAQIELS 244

Query: 230 YKLVQLQTDIPLNTRLANFRV 250
            +LVQL  D+ L+  + +  V
Sbjct: 245 KRLVQLDCDMELDFTIEDLEV 265