Pairwise Alignments

Query, 256 a.a., exonuclease IX (RefSeq) from Shewanella loihica PV-4

Subject, 922 a.a., DNA polymerase I (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (327), Expect = 1e-34
 Identities = 87/267 (32%), Positives = 141/267 (52%), Gaps = 18/267 (6%)

Query: 2   NRFLIIDGLNLVRRIHAAQPN----ENDVNGLPERVTSACRKLLSKHNPSHVTLVWDGDA 57
           N  +++DG + + R + A P+    + +  G    V +  R LLS++ PSH+ +V+D   
Sbjct: 7   NPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAVVFDAKG 66

Query: 58  ISWRKKLYDDYKKGRKPMPEALSQALPALKQHLAERGFHSIDAIA-EADDVIATLASKMV 116
            ++R  LY++YK  R PMP+ L   +  L + +   G   I     EADDVI T+A +  
Sbjct: 67  KTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGTIA-RQA 125

Query: 117 QAKGEAIIVST-DKGFTQLLSPQIQLWDHFNQQAITIEDRERQLGVDRSQFIDFLAMAGD 175
             +  A+++ST DK   QL+   I L +      +  E+   + GV   + IDFLA+ GD
Sbjct: 126 SRENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFLALMGD 185

Query: 176 SGNKIPGIPGIGPKSACELLKTFRTLANVYASLDKI------GAK-QAKKLEEGRALARL 228
             + IPG+PG+G K+A  +L    ++AN+ A  +K+      GAK  A K+ +   + +L
Sbjct: 186 KADNIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVTELGFRGAKTMAAKIIDNADMLKL 245

Query: 229 SYKLVQLQTDIPLNTRLANFRVELTAK 255
           SY+L  ++TD+ L         ELTAK
Sbjct: 246 SYELATIKTDVELEQDWH----ELTAK 268