Pairwise Alignments

Query, 803 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 799 a.a., Outer membrane receptor proteins, mostly Fe transport from Xanthomonas campestris pv. campestris strain 8004

 Score =  453 bits (1165), Expect = e-131
 Identities = 312/832 (37%), Positives = 436/832 (52%), Gaps = 75/832 (9%)

Query: 7   ALAVSSALILPGVHAEDQQATLDQQASFEKIEIIGSRIALRTATDSVAPVDIITAEQLES 66
           ++AVS AL         Q      Q + + + + G+R+A RT  +S +P+DIIT + L++
Sbjct: 8   SIAVSIALAANAFAGTAQAQQPPPQKTLDTLIVTGTRVADRTVAESESPIDIITEQSLQA 67

Query: 67  TGMTETAKALQFAAPSYSFPFSSVTDGSDAVRPASLRGLSPDHTLVLVNGKRRHGSALVH 126
           TG T+ A AL    PS +FP  +++DG+DA RPA+LRGLSPD  LVLV+GKR H SAL++
Sbjct: 68  TGATDIATALGKLLPSLNFPRPAISDGNDAARPATLRGLSPDAVLVLVDGKRYHTSALIN 127

Query: 127 LSGTVGKGSSNVDLNAIPMTAIKRIEILRDGASAQYGSDAIAGVINVVLKDNEQGG--SL 184
            +  VG+GS+  DLN++PM+A+ RIE+LRDGASAQYGSDAIAGV+N+VLK   + G  S+
Sbjct: 128 YNPYVGRGSAPADLNSLPMSAVARIEVLRDGASAQYGSDAIAGVVNIVLKHGAKTGDNSV 187

Query: 185 SAQAGQTYAGDGEQWRLGANHGIALG------DDGFVNVSLEAHHKDSTNRAGLDPRQQY 238
           S   G    GDGEQ  +  + G+  G        G+V +S    +  STNR     R   
Sbjct: 188 SVNGGFMDKGDGEQNGIDGSVGMGFGGTGGDTTPGWVRLSWNYQNTMSTNRGENTNR--- 244

Query: 239 PQLADGSPDPREATFNRKSHQVGDAE---YDNLGLFINAAKAISDNGELYAFGGVSKRET 295
                G+P+P    + R     GD +   Y  L  F       S N ELY     S+RE 
Sbjct: 245 ATTVPGTPNPGGVPYQRH----GDPKSTFYQGLAAF---GYEFSPNLELYGHFSASRREV 297

Query: 296 KSGAFYRRALD-KRNLTEVYPDGFLPQINPEIIDTSLVLGYE-FTLGEWNIDTSAGHGEN 353
            S  +YR A +  RN+  +YP+GFLPQI   + D S VLG +  T  EWN D SA +G+N
Sbjct: 298 TSNGYYRAADNPARNVPSIYPNGFLPQIYNPVNDRSAVLGIKGSTESEWNWDLSASYGKN 357

Query: 354 SFNYNIVNSLNASM---GPDSPTEFDAGTLSTRETNLNIDASRYFNFANDSEILFAAGVS 410
             ++NI+NS+N ++      SPT F++G   T++  +N+D SR F++     +  A G  
Sbjct: 358 DMSFNILNSINTNLFYTTGASPTNFNSGGFETQQGTVNLDISRAFDWGLAYPVNVAFGAE 417

Query: 411 WRKNGYQIEAGESASYINGGFDNRA----------AGSQGFSGFTPESEVDETRDNTGVY 460
            R++ Y+I AG   SY    FD              G+Q FSG  P       R +  VY
Sbjct: 418 HRQDRYRITAGSPDSYF---FDPNTINPADGAPYPGGAQVFSGLEPSVAGKFGRHSNAVY 474

Query: 461 VELENQLTDDFYWAAALRYENYSDFGDNTSWKLAGRYDFTDNLALRGTINTGFRAPSVQQ 520
             LE  LT+      A RYENYSD G   S KL+ RY FTD  +LRGTI+ GFRAPS+ Q
Sbjct: 475 ANLEANLTEKLSGGIAGRYENYSDAGATRSGKLSARYAFTDTFSLRGTISNGFRAPSLAQ 534

Query: 521 LYFSNISTLFNPDPVTGQLVPTESGTFNTLSPVTKGLGINELEPELSQSFSLGLVYRNDA 580
             ++++ TL       G+LV  + GT+ T  PV   LG   L PE S ++ LG V++  A
Sbjct: 535 QNYASVVTLIQ----NGELV--QVGTYRTSDPVALALGARPLSPEKSSNYGLGGVWQPTA 588

Query: 581 GLALTLDAYQISIDDRIILSSSVTPDDSPAVAEALAGTNAESARFFINAVDTRTRGVDLV 640
               +LD YQI I D+I+ S      D   +A+ +      + +FF+N   +RTRGVD V
Sbjct: 589 NFTSSLDVYQIRIWDQILYS------DQLQLAQPIG--QVAAVQFFVNGATSRTRGVDWV 640

Query: 641 ISQDFDIGAWGDLQANLAYAYNKTEIQDIHFPQVLDGVGKELFDRIEQTRMTAATPNNTG 700
            S   D+G  G L    +  YNKT I ++  P          F R  Q  +T ATP    
Sbjct: 641 NSYIADLGELGQLTLGASANYNKTTILELSNPN---------FGRASQGLLTDATPRTKY 691

Query: 701 NLGLTHRLGDFKTNVRLSYFG------DYTVGYSSGDVTYSDQWVMDMSVQYAATEALSF 754
                  +G F  N   + +G      D   G  S D TY  +W++++S       A +F
Sbjct: 692 MASADWAIGGFTLNGNATRYGSIKRISDPVDG--SQDQTYDARWILNLSAS-QTWNAFTF 748

Query: 755 TAGAQNLFDVYPEKRPDSNNFN---GIFVYPLTNTPFGFNGGYVFLEAKYTY 803
           T GA NL + YP K   +  ++   G   Y  + +PFGFNG Y +    Y +
Sbjct: 749 TVGADNLTNQYPTKAQLTTAYDDRAGGLQYS-SLSPFGFNGRYWYGRVTYRF 799