Pairwise Alignments

Query, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella loihica PV-4

Subject, 407 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit from Pseudomonas stutzeri RCH2

 Score =  578 bits (1489), Expect = e-169
 Identities = 272/405 (67%), Positives = 330/405 (81%), Gaps = 4/405 (0%)

Query: 2   EMAIGIGMFTIVVCVLVMVILVAKSKLVINGDVSIRINDDDDKSITTAAGDKLLGALASK 61
           E+ + IGMFT +V  LV++IL A++KLV +GDVSI IN +  ++IT  AG KLL  LAS 
Sbjct: 4   EIFLAIGMFTAIVLALVVIILAARAKLVSSGDVSIEINGE--RTITVPAGGKLLQTLASN 61

Query: 62  NIFIPSACGGGGTCGQCRVKVKSGGGDILPTERDHINKKEAKEGCRLACQVAVKTDMELE 121
           NIF+ SACGGGGTC QC+  V+SGGG++LPTE  H  ++EA EG RL+CQ  VK DM++E
Sbjct: 62  NIFLSSACGGGGTCAQCKCIVESGGGEMLPTEESHFTRREAGEGWRLSCQTPVKADMKIE 121

Query: 122 LEEEIFGVKKWQCEVISNDNQATFIKELLLKLPEGEDVKFKAGGYIQIEAPAHEVKYSDF 181
           + EE+FGVKKW+C V SN N ATFIKEL LKLPEGE+V F+AGGY+Q+E P HEV+Y DF
Sbjct: 122 VPEEVFGVKKWECTVESNPNVATFIKELTLKLPEGENVDFRAGGYVQLECPPHEVRYKDF 181

Query: 182 DIPTEYRDDWEKYGLFDLVSTVEEDVLRAYSMANYPDEKGVIMLNVRIATPPS--EGLPP 239
           DI  EYR DW+K+  +  VS  +E V+RAYSMANYP+E+G++  N+RIA+PP   + +PP
Sbjct: 182 DIQEEYRGDWDKFDQWKYVSKCDETVIRAYSMANYPEERGLVKFNIRIASPPPGRDDIPP 241

Query: 240 GKMSSYIFNLKAGDKVTISGPFGEFFVKETDAEMVFIGGGAGMAPMRSHIFNQLKGEQTK 299
           GKMSSY+F+LK GDK+T+ GPFGEFF K+TD EMVFIGGGAGMAPMRSHIF+QLK  ++ 
Sbjct: 242 GKMSSYVFSLKPGDKITVYGPFGEFFAKDTDNEMVFIGGGAGMAPMRSHIFDQLKRLKST 301

Query: 300 RKMTFWYGARSRREIFYQEEFDALAAENDNFEWHVALSDPLPEDNWDGYTGFIHNVLYEN 359
           RKM+FWYGARS RE FY EE+D L AEN NF+WH+ALSDPLPEDNW+G TGFIHNVLYEN
Sbjct: 302 RKMSFWYGARSMREAFYVEEYDQLQAENPNFQWHLALSDPLPEDNWEGPTGFIHNVLYEN 361

Query: 360 YLKNHKAPEDCEFYMCGPPIMNSSVINMLESLGVEQENILLDDFG 404
           YLK+H APEDCEFYMCGPP+MN+SVI ML  LGVE ENILLDDFG
Sbjct: 362 YLKDHPAPEDCEFYMCGPPMMNASVIKMLTDLGVEPENILLDDFG 406