Pairwise Alignments

Query, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella loihica PV-4

Subject, 422 a.a., Na+-translocating NADH-quinone reductase subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  382 bits (980), Expect = e-110
 Identities = 201/416 (48%), Positives = 279/416 (67%), Gaps = 20/416 (4%)

Query: 7   IGMFTIVVCVLVMVILVAKSKLVINGDVSIRINDDDDKSITTAAGDKLLGALASKNIFIP 66
           IG+F +V+ +LV+++LVAK  LV +G+V + IN +    +   +G  LL  LA   +F+ 
Sbjct: 8   IGVFLVVILLLVVILLVAKKFLVPSGNVKLTINGET--GLEVESGSTLLNTLAVNGVFLS 65

Query: 67  SACGGGGTCGQCRVKVKSGGGDILPTERDHINKKEAKEGCRLACQVAVKTDMELELEEEI 126
           SACGG G+CGQC+ +V  GGG+ILP+E  H ++K+ ++  RL CQV VK+DM ++++E +
Sbjct: 66  SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSRKQQQDHWRLGCQVKVKSDMAIKIDESV 125

Query: 127 FGVKKWQCEVISNDNQATFIKELLLKLPEGEDVKFKAGGYIQIEAPAHEVKY-SDFD--- 182
            GVK+W+CEVISN N ATFIKE ++ LP+GE + F  G Y QI+ P   + Y  D D   
Sbjct: 126 LGVKEWECEVISNKNVATFIKEFIVALPKGEHMDFIPGSYAQIKIPKFSMDYDKDIDKSL 185

Query: 183 IPTEYRDDWEKYGLFDLVSTVEEDVLRAYSMANYPDEKGVIMLNVRIATPPSE------- 235
           I  EY   WEK+GL  L    EE+ +RAYSMANYP E   IML VRIATPP +       
Sbjct: 186 IGEEYLPAWEKFGLLGLKCKNEEETIRAYSMANYPAEGDRIMLTVRIATPPFKPKEQGPG 245

Query: 236 --GLPPGKMSSYIFNLKAGDKVTISGPFGEFF-VKETDAEMVFIGGGAGMAPMRSHIFNQ 292
              + PG  SSYIF LK GDKV +SGP+G+F  + +++ EM++IGGGAGMAP+R+ I + 
Sbjct: 246 FMDVMPGIASSYIFTLKPGDKVIMSGPYGDFHPIFDSNKEMMWIGGGAGMAPLRAQIMHL 305

Query: 293 LKG-EQTKRKMTFWYGARSRREIFYQEEFDALAAENDNFEWHVALSDPLPEDNWDG--YT 349
            K    T RKM+++YGAR+  E+FY E+F  +  +  NF +H+AL  P P  +  G  YT
Sbjct: 306 TKTLHTTDRKMSYFYGARALNEVFYLEDFLQIEKDFPNFTFHLALDRPDPAADAAGVKYT 365

Query: 350 -GFIHNVLYENYLKNHKAPEDCEFYMCGPPIMNSSVINMLESLGVEQENILLDDFG 404
            GF+HNV+YE YLKNH+APED E+YMCGP  M+ +V  ML+ LGV  +N++ D+FG
Sbjct: 366 PGFVHNVIYETYLKNHEAPEDIEYYMCGPGPMSKAVEKMLDDLGVPAQNLMFDNFG 421