Pairwise Alignments

Query, 1157 a.a., DNA polymerase III subunit alpha (RefSeq) from Shewanella loihica PV-4

Subject, 1160 a.a., DNA polymerase III subunit alpha from Klebsiella michiganensis M5al

 Score = 1712 bits (4433), Expect = 0.0
 Identities = 846/1159 (72%), Positives = 977/1159 (84%), Gaps = 2/1159 (0%)

Query: 1    MSEPRFVHLRVHSDFSMSDGLAKVKPILAKASEDQMAALALTDNTNLCGLVKFYGGCHGA 60
            M+EPRFVHLRVHSD+SM DGLAK  P++ KA+   M ALA+TD TNLCGLVKFYG  HGA
Sbjct: 1    MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA 60

Query: 61   GIKPIVGCDFFMLVPGFEDEFCSLTVLAMNNEGYKNLTLLISDAYLRGHVKDRAVIDQAW 120
            GIKPIVG DF +      DE   LTVLA NN GY+NLTLLIS AY RG+     +ID+ W
Sbjct: 61   GIKPIVGADFHVQSDLLGDELSQLTVLAANNAGYQNLTLLISKAYQRGYGAAGPIIDRDW 120

Query: 121  LERYSEGLILLSGAKDGDVGKALLKGNQGQVDSLVAFYQTHFPDRYYLELIRTGRPDEER 180
            L    EGLILLSG + GDVG++LL+GN   VD  V FY+ HFPD Y+LELIRTGR DEE 
Sbjct: 121  LIELKEGLILLSGGRMGDVGRSLLRGNMALVDQCVDFYEQHFPDCYFLELIRTGRQDEEP 180

Query: 181  YLHMAVELAGEKDLPVVATNQVVFIQPEQFEAHEIRVAISDGFTLADPRRPRRYSEQQYF 240
            YLH AV LA  + LPVVATN V F++P  F+AHEIRVAI DGFTL DP+RPR YS QQY 
Sbjct: 181  YLHAAVGLAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM 240

Query: 241  RIQDEMCELFDDIPEALQNSVEIAKRCNVTVRLGEYFLPNFPTGDLSIEDFLVEVSKKGL 300
            R ++EMCELF DIPEALQN+VEIAKRCNVTVRLGEYFLP FPTGD++ ED+LV+ SK+GL
Sbjct: 241  RSEEEMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL 300

Query: 301  EERLEFLFPDEAQRAERRGEYDERLDVELTVINNMGFPGYFLIVMEFIQWGKDNGIPIGP 360
            EERLEFLFPD  +R +RR EYDERLD+EL VIN MGFPGYFLIVMEFIQW KDNG+P+GP
Sbjct: 301  EERLEFLFPDPDERTKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP 360

Query: 361  GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAE 420
            GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCM++RD+VI+HVA+
Sbjct: 361  GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD 420

Query: 421  LYGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKMIPAEPGMTLAKAFEAEPA 480
            +YGRDAVSQIITFGTMAAKAV+RDVGRVLGHPYGFVDRISK++P +PGMTLAKAFEAEP 
Sbjct: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ 480

Query: 481  LPEAYDADEEVKDLIDMCRVLEGVTRNAGKHAGGVVIAPTVITDFAPLYCDAEGHNPVTQ 540
            LPE Y+ADEEVK LIDM R LEGVTRNAGKHAGGVVIAPT ITDFAPLYCD  G +PVTQ
Sbjct: 481  LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ 540

Query: 541  FDKNDVETAGLVKFDFLGLRTLTIIDWALQMINPHLAKQGKEPVRIEAIVLDDPASFRLL 600
            FDKNDVE AGLVKFDFLGLRTLTII+WAL+MIN    K G+ P+ I AI LDD  SF +L
Sbjct: 541  FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEGPLDIAAIPLDDKKSFDML 600

Query: 601  QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGREE 660
            QR ETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFI+RKHGREE
Sbjct: 601  QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE 660

Query: 661  VSYPDQQWQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM 720
            +SYPD QWQHE LKP+LEPTYGIILYQEQVMQIAQ L+GYTLGGADMLRRAMGKKKPEEM
Sbjct: 661  ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM 720

Query: 721  AKQRSVFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA 780
            AKQR  FEEGA K GVDGELA+KIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLK H+PA
Sbjct: 721  AKQRGTFEEGARKRGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA 780

Query: 781  QFMAAVMSADMDNTDKIVTLVDECERMGLPLLPPDVNKGLFRFTVDDDLNIVYGIGAIKG 840
            +FMAAVM+ADMDNT+K+V LVDEC RMGL +LPPD+N GL+ F V+DD  IVYGIGAIKG
Sbjct: 781  EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG 840

Query: 841  VGEGPVESILKAR-EDGPFIDLFDFCARVDLKKLNRRVIEKLICAGALDNLGPHRAAMMA 899
            VGEGP+E+I++AR + G F +LFD CAR D+KKLNRRV+EKLI +GA D LGPHRAA+M 
Sbjct: 841  VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN 900

Query: 900  TLPEAIRAADQHAKAEAIGQHDMFGLLNSEPEDNKQQFVHCTPWPDKVWLEGERDTLGLY 959
            +L +A++AADQHAKAEAIGQ DMFG+L  EPE  +Q + +C PWP++V L+GER+TLGLY
Sbjct: 901  SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQPWPEQVVLDGERETLGLY 960

Query: 960  LTGHPINQYLKELKHYTSG-RLKDVHPTERGKTTKAAGLVVATRVMMTKRGSKMGLVTLD 1018
            LTGHPINQYLKE++ Y  G RLKD+HPT+RGK T AAGLV+A RVM+TKRG+++G+ TLD
Sbjct: 961  LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKVTTAAGLVIAARVMVTKRGNRIGICTLD 1020

Query: 1019 DKSARLEVMLFTEAFEKFGELLEKDRILIVEGEVSFDDFSGGNRMTARSIIDMGEARSHF 1078
            D+S RLEVMLFT+A +K+ +LLEKDRILIV G+VSFDDFSGG +MTAR ++D+ EAR  +
Sbjct: 1021 DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY 1080

Query: 1079 AHAVEVDLDGASITPEWLGQFQQAVEPWKAGSVPLVINYAQPTAKAQFRLGDEWRVNPTD 1138
            A  + + L    I  + L + +Q++EP ++G++P+ + Y +  A+A+ R G  WRV+P+D
Sbjct: 1081 ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD 1140

Query: 1139 ELMLALETLTGSDKVRILF 1157
             L+  L  L GS++V + F
Sbjct: 1141 RLLNDLRGLIGSEQVELEF 1159