Pairwise Alignments

Query, 267 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 4/215 (1%)

Query: 33  GVATGFPPYQFSAGGETTGFDADVARLIFKRLGMPFQFRQQAWDLVFNELRFGDIELIAG 92
           GV T   P  +   GE  GF+ ++   I KRL +  +F   ++  + + +  G+++   G
Sbjct: 35  GVCTDLAPTSYIEDGEFKGFEVELIYEISKRLDLQPEFVVYSFSELLDAVSEGEVDCGIG 94

Query: 93  -MEINALRTKFFDFTRPYYYRYDVIFILEDNQQITKLEDLHNQFVSGDRHSYIETHWKE- 150
            +     R    DF+RPY Y Y  I +  D+  +  ++ L N+ V   + S IE +W E 
Sbjct: 95  YIGKTPERQLKMDFSRPYGYTYSTILVRSDSNCVG-IKCLENKSVGVLKDS-IEEYWLES 152

Query: 151 LGTLYDFRIIATPSKERSMQLLKEGKIQAAIMPKAVGLYLAQQMGIEVKILDNPDPGSPV 210
           L    DF+II   ++      L  GKI + +      LYL Q    E+KI+ +      V
Sbjct: 153 LLKSMDFKIIIYENQNDINNDLLSGKIDSEVTDHITSLYLIQDYDTELKIVGDKFDIIYV 212

Query: 211 AFAVKRGNHQLLVQIDEALEALISEGEIQRLYEKW 245
           A A+   N +L   ID AL  + ++G + +L EKW
Sbjct: 213 AIAIDNTNPELKKSIDVALLEMENDGTLVKLKEKW 247