Pairwise Alignments

Query, 578 a.a., pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

Subject, 211 a.a., pseudouridine synthase from Pseudomonas fluorescens FW300-N2C3

 Score =  147 bits (372), Expect = 3e-40
 Identities = 90/213 (42%), Positives = 123/213 (57%), Gaps = 14/213 (6%)

Query: 374 DLSIIYQDEAIAVVNKPAEFLSVPGK--HVTDSVYSRMRQ-AFPKATGPLIVHRLDMSTS 430
           ++ II+QD A+ VV+KP   LSVPG+     D + +R+++  +P+A    IVHRLD  TS
Sbjct: 5   NIRIIHQDAAVLVVDKPTLLLSVPGRADDNKDCLITRLQENGYPEAR---IVHRLDWETS 61

Query: 431 GLMVIALSSEANTALVQQFIGRTVEKRYLARVAGEVQGEEGEITLPLRVDLDDRPRQLVC 490
           G++++A   + +  L +QF  R  EK Y A   G+ + + G I LPLR D   +PR +V 
Sbjct: 62  GIILLARDPDTHRELSRQFHDRETEKAYTALCWGQPELDSGSIDLPLRYDPPTKPRHVVD 121

Query: 491 FEHGKHAHTYWLVKSRGEGTTLLSLFPKTGRTHQLRVHCAHQDGLGMPIIGDDLYG---- 546
            E GKHA T+W V  R      + L P TGR+HQLRVH      +G P++GD LY     
Sbjct: 122 HEQGKHALTFWRVLERCGDWCRVELTPITGRSHQLRVHML---SIGHPLLGDGLYAHPQA 178

Query: 547 -AKANRLHLHAQYLAFNHPISGERVSFSCDPDF 578
            A   RL LHA  L+F HP SGER+ F C   F
Sbjct: 179 LAAWPRLCLHASMLSFTHPQSGERLRFECPAPF 211