Pairwise Alignments

Query, 387 a.a., transcriptional regulator, CdaR (RefSeq) from Shewanella loihica PV-4

Subject, 392 a.a., Sugar diacid utilization regulator SdaR from Xanthomonas campestris pv. campestris strain 8004

 Score =  274 bits (700), Expect = 4e-78
 Identities = 151/376 (40%), Positives = 228/376 (60%), Gaps = 2/376 (0%)

Query: 1   MYFLDNQLAQQIVDRTMAIIGHNINVMNSQGVILGSGEPHRIGSTHEGALLAISQNRTVE 60
           M  LD  LAQ IVDR+M II  N+NVM+  GVI+ SG+P RIG  HEGALL +S+   VE
Sbjct: 1   MLTLDRTLAQSIVDRSMTIIDGNVNVMDHTGVIVASGDPARIGQLHEGALLVLSRQGRVE 60

Query: 61  LNSASAASLQGVKPGINLPLHYQGEIIGVIGITGEPEHLKAFGELLKMTAEMIVEQANSL 120
           +++A A  L  V+PG+NLPL   G ++G +G+TG+P  +    EL++M AE ++EQA  L
Sbjct: 61  IDAALAQQLDAVRPGVNLPLIVDGRVLGCVGLTGDPARIGQQAELVRMAAEAMLEQAGLL 120

Query: 121 DVAQWRARQQEEFILQLIKPEGRDLNHLKIWAQRLDIDLEMPRVAAVLRISDDAGD-ELA 179
            +    AR +EE  L LI+ +G     L  WA+RL I L++PRVAAV+ +  D  D +  
Sbjct: 121 RLLARDARLREEVTLGLIRTDG-PTPALAGWAERLGIALDLPRVAAVIEVESDTLDLDAM 179

Query: 180 NSQLKTVLHLLETPSRGNLIAMTSMTELVILKPAFLDGKAWSAEAESLRIDRLLKRLPSE 239
             +L+ +  LL TP RGNLIA T++ ELV+LKPA      W+ + +  R   LL+R+ + 
Sbjct: 180 LVELQRLHTLLSTPERGNLIAATALNELVVLKPALDRRGQWNVDEQRRRAHTLLERMRAS 239

Query: 240 LNARLKISLGHYFPATMDINRSYQTALETLNFGQQLHPEQSKYLYEDHALLVMLSGLKHD 299
              R++++LG YFP    +  S+Q A  T+  G+   P    + ++D+ L V++  L+  
Sbjct: 240 SPLRIRLALGQYFPQPNGLALSHQIARTTMRIGKARTPGADAFFFDDYRLPVLVDDLRQA 299

Query: 300 WRGEQLLRPFQRLIDRDKNALLRKTLASYLGHFGDQQACAKALFIHRNTLRYRLDKIAQI 359
           W+ E+L +P Q L+ +D+ + L +TL+ +  +       AKAL IHRNTL YR+ +I  +
Sbjct: 300 WQAEELRKPLQALLTQDRRSQLLQTLSCWFANGMRMTPTAKALGIHRNTLDYRMQRIQDL 359

Query: 360 TKVDIQKLDGLLQLYL 375
             V++   D  ++LYL
Sbjct: 360 CAVNLGVTDDCMRLYL 375