Pairwise Alignments

Query, 621 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) from Shewanella loihica PV-4

Subject, 633 a.a., SurA N-terminal domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  129 bits (323), Expect = 5e-34
 Identities = 123/562 (21%), Positives = 239/562 (42%), Gaps = 41/562 (7%)

Query: 1   MLEKIREGSQGVIAKGILVLV----ILSFAFTGVSSYLGSSSEPSAATVNGEEISKSALE 56
           ML  +R+ S   I K I+ +V    I+SF   G++         + A +   EIS     
Sbjct: 1   MLRGMRKASSNWIGKTIMTIVMGVLIVSFGVWGIADVFRGFGRSTLAKIGSTEISTEQFR 60

Query: 57  QAYQSERARLEQQLGDMYDTLASNESYLASVKQNVLERLIADKLVDQAAADLGLTVSDQQ 116
           Q Y     ++ +Q G     L  +++    + + VL++ IA+  +D+ A  LGL  SD  
Sbjct: 61  QTYNDRLQQIGRQFGR---PLTPDQARAIGIDRQVLQQTIAEAALDEDARRLGLGQSDAD 117

Query: 117 IKTAIMNEPAFQ-TDGKFDNDRYLALIRQLGYQANSFRDMMRGDMTRRQLVVTVVGSEFV 175
              +I+ +P F+  +G+FD +R+  LIRQ G+    +    R    RRQ+  ++      
Sbjct: 118 TMKSILEDPNFKGANGQFDANRFQQLIRQFGFTEQRYLAEQRRVALRRQIAGSLTAGLEA 177

Query: 176 LPGEAEYLAKIQGQTRDIRYHVVDAEPMLATVSVSDEEANTYYQQNQSLFVRPETISLDY 235
                + L++ Q + R I Y  +         + S  +   +Y  +++ F  PE   + +
Sbjct: 178 PKTLMQALSQFQSEERAIDYLKLTDAQAGTIAAPSPADLTAFYDSHKAQFRAPEYRKISF 237

Query: 236 IELSANQLASAIQVSDEEAKTYYDENKAQYLQPEKRLAAHILVSLGDDEDAAKAKAEAIM 295
           + ++   +A   +VSD +A+  +++ K +   PEKR    I+    ++  A +A      
Sbjct: 238 LVVTPESIAKWAEVSDADAQKLFEQRKDKLSTPEKRQLLQIVFPSVEEAQAGRA------ 291

Query: 296 TKLKAGEDFEALAKSDSDDSFSGEQGGKLDW---FEQGVMEAPFDQALFALEKGQYSDIV 352
            K+ +G  F  LAK        G +   LD     +  +++     A FAL   + S  V
Sbjct: 292 -KIASGTSFADLAKE------RGVKPADLDLGLVSQSEMLDQKVAAAAFALPLNEVSQPV 344

Query: 353 KTSFGYHIIKLLDLQAASTSPFEAVKDKIVAQIQQDKAVNEFYTLQQRLSDVSYEVPDTL 412
           +  FG  ++++  ++      + +V   +   + Q++A  +   L  ++ D +     ++
Sbjct: 345 QGQFGTVLLEVTKIETGKQPDYASVAASLKRDLAQERARKQVQELHDKMED-ARGGGASV 403

Query: 413 AEAAKEVGVAVKTSPVFTR-----DNAPEPL--NSADVLKAAFSNTVLLDGMNSDVIELG 465
            +AAK++G+   T     R     D AP        ++  AAF++     G+++D I   
Sbjct: 404 VDAAKQLGLTAVTVDAIDRAGRGPDGAPVASIPQGLELANAAFNSE---PGVDNDAISF- 459

Query: 466 DNHVVVVRVNKHAAAGTMEFADVKATIVERLKQDKANELARDKAQEMMAAIKGGE----- 520
            N  V   +     +      +VK  +    + ++  E  R  A E++  ++GG      
Sbjct: 460 QNGYVWYDILGITPSHERPLDEVKDKVEAGWRAEQVTEKLRKLAAELVQKLQGGAKLSDV 519

Query: 521 IPAEMITRTQLSRGEQGIDTSI 542
            PA +  +T      +G D  +
Sbjct: 520 APAGVTVQTASGIKREGADAGL 541