Pairwise Alignments

Query, 261 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  216 bits (549), Expect = 1e-60
 Identities = 113/254 (44%), Positives = 176/254 (69%), Gaps = 7/254 (2%)

Query: 5   LLKVNRLSKTFFAGYKGF--KRQYNHALEPISFELNRGETLAIVGETGSGKSTLARILVG 62
           LL+V  LSK +  G   F  KR++  A++ +SF L RGET+ IVGE+GSGKS++AR+L+ 
Sbjct: 281 LLQVAHLSKHYKLGSGPFSPKREFR-AVDDVSFTLRRGETVGIVGESGSGKSSIARMLLR 339

Query: 63  AEQRTDGEILFEGE---ALESRNLKQRCRLIRMIFQDPNTSLNPRLTVGELLDEPLRFNT 119
             + T G  LF GE    L+ + L    R ++M+FQDP  S+NPR+ V  ++ EP   + 
Sbjct: 340 LNEPTSGAALFAGEDIFELKGKALDGFRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHR 399

Query: 120 DLDKQARFAQ-VVDTLRKVGLLPEHADFYPHMISEGMKQRVAVARALMLNPKIIIADEAL 178
           D+  + R+ + VV+ L  VGL  EHA  +PH  S G +QR+A+ARAL   P++I+ DEA+
Sbjct: 400 DILPRERWNERVVELLELVGLKAEHAARHPHQFSGGQRQRIAIARALASEPELIVCDEAV 459

Query: 179 TALDLSVRSQILNLLLKLQQEMGLSYIFVSHNMNIIRHFSDKIMVLHQGKMVEKATTEKL 238
           +ALD+S++ Q++ LL  L+Q +GLSY+F++H++ I+R F+D+I+V+ +G++VE+  TE L
Sbjct: 460 SALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVEEGETEAL 519

Query: 239 FNAPEHEYTQRLIQ 252
           F +P+HEYTQ L++
Sbjct: 520 FVSPQHEYTQALLR 533



 Score =  162 bits (409), Expect = 2e-44
 Identities = 98/259 (37%), Positives = 152/259 (58%), Gaps = 16/259 (6%)

Query: 4   PLLKVNRLSKTFFAGYKGFKRQYNHALEPISFELNRGETLAIVGETGSGKSTLARILVGA 63
           P+L++++L+  F +     +     A++ +SF++  GETL I+GE+GSGKS     ++G 
Sbjct: 7   PILRIDKLTVDFLSEGDPVR-----AVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGL 61

Query: 64  EQRTDGEIL-----FEGEALESRNLKQRCRL----IRMIFQDPNTSLNPRLTVGELLDEP 114
                G+I+     F+G  L   + + R  L    I MIFQDP   LNP  TVG  + E 
Sbjct: 62  IDCPPGDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEV 121

Query: 115 LRFNTDLDKQARFAQVVDTLRKVGL--LPEHADFYPHMISEGMKQRVAVARALMLNPKII 172
              + + +  A   +VV  L +VG+    E  D+YPH  S G +QRV +A A+ L P I+
Sbjct: 122 FESHGEGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDIL 181

Query: 173 IADEALTALDLSVRSQILNLLLKLQQEMGLSYIFVSHNMNIIRHFSDKIMVLHQGKMVEK 232
           IADE  TALD+SV++QIL LL  LQ+E G++ I ++H++ +    +D+I+V++ GK+VE 
Sbjct: 182 IADEPTTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVES 241

Query: 233 ATTEKLFNAPEHEYTQRLI 251
              E +F  P H YT+RL+
Sbjct: 242 GKAEDVFTNPSHAYTRRLM 260