Pairwise Alignments

Query, 300 a.a., histone deacetylase superfamily protein (RefSeq) from Shewanella loihica PV-4

Subject, 342 a.a., acetylpolyamine aminohydrolase from Cupriavidus basilensis FW507-4G11

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 20/172 (11%)

Query: 120 HHAHYQFGSGYCVFNDLISAALHAQSLAGIVTVLIFDCDVHQGDGTAAMGQAYDNLYTCS 179
           HHA+    +G+C  N+   AA H +     V +L  D D+H G+GT  +    +++ T S
Sbjct: 158 HHAYVDRANGFCYLNNTAIAAQHLRRHHDRVAIL--DIDMHHGNGTQGIFYRRNDVLTVS 215

Query: 180 IH-------------CQENFPARKQTSDLDLELSRGVGDEEYLEAVAQTLALAIRLYQPD 226
           +H               E   A     +++  L+RG GDE YL A+ + +  +IR + P 
Sbjct: 216 LHGDPMLFTPFFTGHAHERGEAEGLGYNINRPLARGTGDEAYLAAL-RDVCQSIRAFAPG 274

Query: 227 LIIYDAGVDVHQADRLGHLNITTEGIYQRDRLVLDNAKAASIPIACVVGGGY 278
            ++   G+D H+ D    L +TT G      L+        +P   V  GGY
Sbjct: 275 ALVVALGLDAHERDPYQALAVTTPGF----ALITAEIARLGLPTVLVQEGGY 322