Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

 Score =  466 bits (1199), Expect = e-135
 Identities = 281/721 (38%), Positives = 405/721 (56%), Gaps = 40/721 (5%)

Query: 1   MLSADVKTQIRTIYKEIAAALPNFRSRREQNYIVAEISKTLA-------GEYDKHRRIIV 53
           MLS ++K+QI+  Y     A    ++R  Q  ++AE++K L        G  +    ++ 
Sbjct: 1   MLSTELKSQIQGAYTRFLEA-KGLKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVA 59

Query: 54  VEAGTGIGKSLAYILGSIPLALASKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFG 113
           VEAGTG GK++AY L +IP A A+ K++ IATATVALQEQ+++KDLP   + SGLNF+F 
Sbjct: 60  VEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFA 119

Query: 114 LVKGRQRYVCLSKLEMLIGGDDGTQMAM-------WQTKPDHNQVELLQGLLKDFHEGRW 166
           L KGR RY+CLSKL++L+                 ++ + D    +L   +++     RW
Sbjct: 120 LAKGRGRYLCLSKLDLLLQEGQAQSATAQLFEEEGFRIEVDERSQKLFTSMIEKLAGNRW 179

Query: 167 NGERDTLSQQLPDHLWQQIACDKHSCH-RQLASHRHCPFHKAREDVDTWDVLIANHSLLF 225
           +G+RD+  ++L D  W Q+  D   C  R   + + C F+KARE +   DV++ NH ++ 
Sbjct: 180 DGDRDSWPEELGDSDWSQLTTDHSQCTGRHCPNFQQCAFYKAREGMTKVDVIVTNHDMVL 239

Query: 226 ADLELGGGVILPDPEELYYVIDEAHHLPIVARDFSSAQATLRGAIDWLEKVGKTSAKLQN 285
           ADL LGGG +LPDP E  YV DE HHLP  A    +    LR   DWL +V K   KL  
Sbjct: 240 ADLALGGGAVLPDPRETIYVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNLTKL-- 297

Query: 286 QLKSYNIIAPAQAMLDHINDLTSLLTSVAQY----CDGQAAKF------DNPER-RIRFE 334
            L  + +      +++ I +L   L +  Q+    C+ Q A F      +  ER R RF 
Sbjct: 298 -LAQHPLPGELGRLVEGIPELARELRTQQQFMFSACE-QLADFKAGEDMEGRERPRHRFV 355

Query: 335 HGKLPAALTMLAENLATASSSALKQFNKMLVLLNEAIKDGE----LPKHQSEQLLSETGF 390
            G +P  L  L   L    +     F ++  LL E + DGE    +  HQ+E+     G 
Sbjct: 356 GGVVPEHLVELGTELKKGFAKLTDLFTRIAELLKEDM-DGETGSGIASHQAEEWYPLFGS 414

Query: 391 MLQRLENLQKLWKMMAKEDSAKGAPMARWVEHLVGKQS-DYLFNVSPIEVGYMLETLLWE 449
           +L R +   +LW     ED     PMARW+    G    D   N SPI     L   LW 
Sbjct: 415 LLTRSQGNWELWTAFTVEDPEDSPPMARWLTLAEGGALFDIEVNASPILAAETLRRNLWN 474

Query: 450 KAAGVVLCSATLRALNNFNHFTHQVGLSINDGSRYLAMDSPFDFQQNATLYLPKMRTEPT 509
            A G ++ SATL ALN+F+ +  + GL    G+    + SPF       L +P ++ +P 
Sbjct: 475 VAFGALVTSATLTALNSFDRYRMRAGLP--KGAVTAVVPSPFHHADAGVLRVPDLKADPR 532

Query: 510 DDR-YTDELAEQILTLIDGEMATLVLFASYWQMEKVADLVRSKIKSPLLIQGEASRQQLL 568
           D   +T  +  ++  L++G   TLVLF+S  QM+ V D +    +  +LIQG  S+Q+ L
Sbjct: 533 DAAAHTAAIVRELPALVEGARGTLVLFSSRKQMQDVFDGLERDWRRRVLIQGNLSKQETL 592

Query: 569 QDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLIITKLPFAVPTSPVEQAHAEYIKAK 628
             HK R D+GE S++FG  SF+EG+DLPG Y  +++I K+PFAVP  PVE A AE+I A+
Sbjct: 593 NKHKARVDDGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAALAEWIGAR 652

Query: 629 GGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITILDRRLVTKRYGKSLLDALPPFRQV 688
           GGNPF+++ +PDAS +L+Q+CGRLLR E D G IT+LDRR+VT+RYGK++L+ALPPFR+ 
Sbjct: 653 GGNPFMEIAVPDASLRLVQACGRLLRTETDRGTITLLDRRVVTQRYGKAILNALPPFRRE 712

Query: 689 I 689
           I
Sbjct: 713 I 713