Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 644 a.a., ATP-dependent DNA helicase from Rhodanobacter denitrificans MT42

 Score =  242 bits (618), Expect = 4e-68
 Identities = 198/680 (29%), Positives = 314/680 (46%), Gaps = 76/680 (11%)

Query: 18  AAALPNFRSRREQNYIVAEISKTLAGEYDKHRRIIVVEAGTGIGKSLAYILGSIPLALAS 77
           A  LP+F  R  Q  +   + + + G     R  +V EAGTG GK+ AY++     AL S
Sbjct: 23  ARELPDFAPRLAQQVMARAVQQAIVG-----RDTLVAEAGTGTGKTYAYLVP----ALRS 73

Query: 78  KKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFGLVKGRQRYVCLSKLEMLIGGDDGT 137
            ++V I+T T ALQ+QL  +DLP      G      L+KGR  Y+CL +LE  +   +G 
Sbjct: 74  GERVIISTGTKALQDQLYFRDLPKVRSVLGARLKTALLKGRANYLCLYRLEQTVR--EGA 131

Query: 138 QMAMWQTKPDHNQVELLQGLLKDFHEGRWNGERDTLSQQLPDH--LWQQIACDKHSCHR- 194
            +       D  Q   L   ++ +      G+R  L++ +P+   LW ++     +C   
Sbjct: 132 SL-------DRAQAAQL-ATIRAWSARTRRGDRMELAE-VPEESPLWPRVTSTAENCLGV 182

Query: 195 QLASHRHCPFHKAREDVDTWDVLIANHSLLFADLEL---GGGVILPDPEELYYVIDEAHH 251
           +   +  C   KAR +    DV++ NH LLFADL L   G G ILP      +++DEAH 
Sbjct: 183 ECPFYDDCHVFKARREAMEADVVVVNHHLLFADLALKQEGFGEILPGAAA--FILDEAHQ 240

Query: 252 LPIVARDFSSAQATLRGAIDWLEKVGKTSAKLQNQLKSYNIIAPAQAMLDHINDLTSLLT 311
           +P +A  F S   + R   D  +      + +   +    ++ P +A+ + +  L   + 
Sbjct: 241 IPELAGQFFSQSVSARQLTDMAQDTLTECSGVTGAIGL--LLEPVEALQNALRKLRLAMD 298

Query: 312 SVAQYCDGQAAKFDNPERRIRFEHGKLPAALTMLAENLATASSSALKQFNKMLVLLNEAI 371
            +     G  A  +        +  ++ AAL  L E LAT +     Q  +   L N   
Sbjct: 299 PLPSR--GAFALLE--------DRAEVRAALHELGELLATLAELLASQAERSRGLAN--- 345

Query: 372 KDGELPKHQSEQLLSETGFMLQRLENLQKLWKMMAKEDSAKGAPMARWVEHLVGKQSDYL 431
                  H+  +L +E          LQ++ +    +D        RW E        + 
Sbjct: 346 ------LHERAELFAE---------RLQRVVETHGDQD-------VRWYETF---PRGFA 380

Query: 432 FNVSPIEVGYMLETLLWEKAAGVVLCSATLRALNNFNHFTHQVGLSINDGSRYLAMDSPF 491
              +P+++   +  L     A  +  SATL    NF+HF  Q+GL   D  R L +DSPF
Sbjct: 381 LYATPLDLAAPMRGLRERTQAAWIHTSATLSVAGNFDHFARQLGL---DEPRTLCLDSPF 437

Query: 492 DFQQNATLYLPKMRTEPTDDRYTDELAEQILTLIDGEMA-TLVLFASYWQMEKVADLVRS 550
           D+ + A  YLP    +P    YT+ + E +L ++        +LF S+  + + A+L++ 
Sbjct: 438 DYARQALCYLPSGLPDPNARDYTERVIEAVLPVLHASRGRAFLLFTSHRALRRAAELLQD 497

Query: 551 KIKSPLLIQGEASRQQLLQDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLIITKLPF 610
           K   PL +QG A R +LL++ +    +G   ++ G  SF EG+D+ G+ L+ ++I KLPF
Sbjct: 498 KAPWPLFVQGSAPRPRLLEEFRA---SGH-GVLLGAASFWEGVDVVGEALSVVVIDKLPF 553

Query: 611 AVPTSPVEQAHAEYIKAKGGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITILDRRLV 670
           A P  PV  A    ++  G NPF+   +P A   L Q  GRL+R   D G + + D RL 
Sbjct: 554 AAPDDPVLMARLAALEQSGINPFMGWQVPSAVIALKQGAGRLIRSVHDRGVLVLCDPRLT 613

Query: 671 TKRYGKSLLDALPPFRQVIE 690
            K YGK  L ++PP  +  E
Sbjct: 614 GKGYGKLFLASVPPMPRTRE 633