Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 713 a.a., ATP-dependent DNA helicase from Ralstonia solanacearum GMI1000

 Score =  212 bits (539), Expect = 6e-59
 Identities = 196/703 (27%), Positives = 313/703 (44%), Gaps = 93/703 (13%)

Query: 17  IAAALPNFRSRREQNYIVAEISKTLAGEYDKHRRIIVVEAGTGIGKSLAYILGSIPLALA 76
           +A  + ++R R  Q  +   ++  +          ++VEAGTG GK+ AY++     A+ 
Sbjct: 45  LAQGIESYRPRTSQLTMAQAVANAIEAADS-----LIVEAGTGTGKTYAYLVP----AML 95

Query: 77  SKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFGLVKGRQRYVCLSKLEMLIGGDDG 136
              KV ++T T  LQ+QL  +D+P   K      +  L+KGR  YVC   LE        
Sbjct: 96  WGGKVILSTGTKNLQDQLFLRDIPTVRKALNAPVSVALLKGRANYVCHYHLERT------ 149

Query: 137 TQMAMWQTKPDHNQVELLQGLLKDFHEGRWNGERDTLSQQLPDHLWQQIACDKHSC-HRQ 195
           +Q     ++ D   +  +   LK    G    E   + +  P  +W  +   + +C   +
Sbjct: 150 SQNGRLSSRQDAAWLREINRFLKTTKTGD-KAELSAVPENAP--VWNLVTSTRDNCLGSE 206

Query: 196 LASHRHCPFHKAREDVDTWDVLIANHSLLFADLEL---GGGVILPDPEELYYVIDEAHHL 252
            A ++ C   +AR++    D+++ NH L FAD+ L   G   +LP    +  + DEAH L
Sbjct: 207 CAYYKDCFVMRARKEAQQADMVVVNHHLFFADVMLKDTGMAELLPAANTV--IFDEAHQL 264

Query: 253 PIVARDFSSAQATLRGAIDWLEKVGKTSAKLQNQLKSYNIIAPAQAMLDHINDLTSLLTS 312
           P  A  F                 G+T +   NQL      + A+  L H  D    +  
Sbjct: 265 PETATLF----------------FGETIST--NQLLELARDSVAEG-LSHARDAVDWVAI 305

Query: 313 VAQYCDGQAAKFDNPERRIRFEHGKLPAALTMLAENLATASSSALKQFNKMLVLLNEAIK 372
                   AA  +   R +R    +  A L+M   +   A S   K F ++L  L +A+ 
Sbjct: 306 --------AAPLERAARDLRLVFRQDGARLSMKQIDSDAALS---KPFYEVLPKLEQALS 354

Query: 373 D--GELPKHQS-----EQLLSETGFMLQRLENLQKLWKMMAKEDSAKG---------APM 416
           D  G L          EQ       +  +LE     W       +AK          AP+
Sbjct: 355 DFTGALEAQAERAETIEQCHRRAVALCDKLE----AWAAPRPAPAAKADGEAALEAEAPV 410

Query: 417 ---ARWVEHLVGKQSDYLFNVSPIEVGYMLETLLWEKAAGVVLCSATLRALNNFNHFTHQ 473
               RWVE        +L   +P+ +  +       +    +  SATL    NF H+  Q
Sbjct: 411 DERVRWVEVFANAVQLHL---TPLSIAPIFSRQRAGQPRAWIFTSATLSVRGNFTHYAAQ 467

Query: 474 VGLSINDGSRYLAMDSPFDFQQNATLYLPKMRTEPTDDRYTDELAEQILTLIDGEMA-TL 532
           +GL   D  R + +DSPFD+     LY+P+   +P+D R+TD + +  L +I+     T 
Sbjct: 468 LGL---DRDRSMTLDSPFDYASQGLLYVPRDLPQPSDPRFTDAVLDAALPMIEAAGGKTF 524

Query: 533 VLFASYWQMEKVADLVRSKIKS-----PLLIQGEASRQQLLQDHKQRCDNGEVSIIFGTG 587
           VL  +   + + A+ +  +        PLL+QG+ASR +LL+  +   +    +++ G+ 
Sbjct: 525 VLCTTLRAVNRAAERLTDEFAQRGWDFPLLVQGQASRTELLERFRALGN----AVLVGSQ 580

Query: 588 SFSEGLDLPGDYLTNLIITKLPFAVPTSPVEQAHAEYIKAKGGNPFLQLTIPDASRKLIQ 647
           SF EG+D+ G+ L+ ++I KLPFA P  PV  A  E ++ KG +PF    +P A   L Q
Sbjct: 581 SFWEGVDVRGEALSLVVIDKLPFAPPDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQ 640

Query: 648 SCGRLLRKEEDYGRITILDRRLVTKRYGKSLLDALPPFRQVIE 690
             GRL+R E D G + I D RLV K YG+ +  +LPPF++  E
Sbjct: 641 GAGRLIRSESDRGVLMICDPRLVEKSYGRQIWQSLPPFKRTRE 683