Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 714 a.a., ATP-dependent DNA helicase DinG from Pseudomonas sp. BP01

 Score =  452 bits (1162), Expect = e-131
 Identities = 275/721 (38%), Positives = 404/721 (56%), Gaps = 40/721 (5%)

Query: 1   MLSADVKTQIRTIYKEIAAALPNFRSRREQNYIVAEISKTLAGEY--DKHRR-----IIV 53
           M+S ++K  I+  Y     A  + + R  Q  ++AE++K L      D+ RR     ++ 
Sbjct: 1   MISTELKATIQGAYSRFLEA-KSLKPRYGQRLMIAEVAKVLGDIACDDEGRRAGEPAVVA 59

Query: 54  VEAGTGIGKSLAYILGSIPLALASKKKVCIATATVALQEQLLNKDLPFFSKQSGLNFTFG 113
           VEAGTG GK++AY L +IP A A+ K++ IATATVALQEQ++ KDLP   + SGLNF+F 
Sbjct: 60  VEAGTGTGKTVAYSLAAIPAAKAAGKRLVIATATVALQEQIVFKDLPDLMRNSGLNFSFA 119

Query: 114 LVKGRQRYVCLSKLEMLIGGDDGTQMAM-------WQTKPDHNQVELLQGLLKDFHEGRW 166
           L KGR RY+CLSKL++L+                 ++ + D    +L   +++     RW
Sbjct: 120 LAKGRGRYLCLSKLDILLQEGHAQSATAQLFEEEGFRIEVDERSQKLFNSMIEKLAGNRW 179

Query: 167 NGERDTLSQQLPDHLWQQIACDKHSCH-RQLASHRHCPFHKAREDVDTWDVLIANHSLLF 225
           +G+RD+ S+ L D  W ++  D   C  R   + + C F+KARE +   DV++ NH ++ 
Sbjct: 180 DGDRDSWSEALEDQDWARLTTDHSQCTGRHCPNFQQCVFYKAREGMGKVDVIVTNHDMVL 239

Query: 226 ADLELGGGVILPDPEELYYVIDEAHHLPIVARDFSSAQATLRGAIDWLEKVGKTSAKLQN 285
           ADL LGGG +LPDP +  YV DE HHLP  A    +  + LR   DWLE+  K   KL  
Sbjct: 240 ADLALGGGAVLPDPRDTMYVFDEGHHLPDKAIGHFAHYSRLRSTADWLEQTAKNLTKL-- 297

Query: 286 QLKSYNIIAPAQAMLDHINDLTSLLTSVAQY----CDGQAAKF------DNPER-RIRFE 334
            L  + +       ++ + +L   + +  Q+    C+ Q A F      +  ER R RFE
Sbjct: 298 -LAQHPLPGDLGKYIEQVPELAREVRTQQQFMFTLCE-QVADFRPSEDTEGRERPRYRFE 355

Query: 335 HGKLPAALTMLAENLATASSSALKQFNKMLVLLNEAIKDGE----LPKHQSEQLLSETGF 390
            G +P  +  +   L    +     F ++  LL E + DGE    +  HQ+E+     G 
Sbjct: 356 GGVVPEQMREVGIELKKGFARLNDLFTRLADLLKEGM-DGEVNIGIASHQAEEWYPLFGS 414

Query: 391 MLQRLENLQKLWKMMAKEDSAKGAPMARWVEHLV-GKQSDYLFNVSPIEVGYMLETLLWE 449
           ++ R +   +LW     ED     PMARW+     G   D   N SPI    ML   LW 
Sbjct: 415 LVTRAQGNWELWTAFTAEDPEDSPPMARWLTLAESGAMFDIEVNASPILAAEMLRRSLWS 474

Query: 450 KAAGVVLCSATLRALNNFNHFTHQVGLSINDGSRYLAMDSPFDFQQNATLYLPKMRTEPT 509
            A G ++ SATL AL  F+ F  + GL  +  +    + SPF       L +P ++ +P 
Sbjct: 475 VAHGALVTSATLTALGKFDRFRMRSGLPRDAVT--CVVPSPFVHGDAGLLRVPDLKADPR 532

Query: 510 DDR-YTDELAEQILTLIDGEMATLVLFASYWQMEKVADLVRSKIKSPLLIQGEASRQQLL 568
           D   +T  +  ++  +++     LVLF+S  QM+ V D +    +  +LIQG  S+Q+ L
Sbjct: 533 DAAAHTAAIIRELPNIVEDARGALVLFSSRKQMQDVFDGLDRDWRKLVLIQGNLSKQETL 592

Query: 569 QDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLIITKLPFAVPTSPVEQAHAEYIKAK 628
             HK R D+G+ S++FG  SF+EG+DLPG Y  +++I K+PFAVP  PVE A AE+I+A+
Sbjct: 593 NKHKARVDDGQHSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAALAEWIEAR 652

Query: 629 GGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITILDRRLVTKRYGKSLLDALPPFRQV 688
           GGNPF+++ +PDAS KLIQ+CGRLLR E+D G IT+LDRRLVT+RYGK++L+ALPPFR+ 
Sbjct: 653 GGNPFMEIAVPDASLKLIQACGRLLRTEQDRGVITLLDRRLVTQRYGKAILNALPPFRRE 712

Query: 689 I 689
           I
Sbjct: 713 I 713