Pairwise Alignments

Query, 690 a.a., ATP-dependent DNA helicase DinG (RefSeq) from Shewanella loihica PV-4

Subject, 755 a.a., helicase from Burkholderia phytofirmans PsJN

 Score =  199 bits (506), Expect = 4e-55
 Identities = 180/685 (26%), Positives = 296/685 (43%), Gaps = 103/685 (15%)

Query: 42  AGEYDKHRRIIVVEAGTGIGKSLAYILGSIPLALASKKKVCIATATVALQEQLLNKDLPF 101
           AG  D     ++VEAGTG GK+ AY++     A+    KV ++T T  LQ+QL  +D+P 
Sbjct: 116 AGGLDGSENTLIVEAGTGTGKTYAYLVP----AMLWGGKVIVSTGTKHLQDQLFQRDIPT 171

Query: 102 FSKQSGLNFTFGLVKGRQRYVCLSKLEMLIGGDDGTQMAMWQTKPDHNQVELLQGLLKDF 161
                 +  +  ++KGR  Y+C   L+     D+G         P   +   LQ +++  
Sbjct: 172 VRDALAVPVSVAMLKGRANYLCHYYLQRT--ADNGRL-------PSRQETSYLQDIVRFA 222

Query: 162 HEGRWNGERDTLSQQLPDHLWQQIACDKHSCHRQLASH-RHCPFHKAREDVDTWDVLIAN 220
              R   + +  S      +W  +   + +C  Q   H + C   +AR +    D+++ N
Sbjct: 223 KITRTGDKAELASVPETAAVWSMVTSTRENCLGQECPHYKDCFVMQARREAQQADIVVVN 282

Query: 221 HSLLFADLEL---GGGVILPDPEELYYVIDEAHHLPIVARDF------------------ 259
           H L FAD+ L   G   +LP    +  + DEAH LP  A  F                  
Sbjct: 283 HHLFFADIMLRDTGMAELLPTANTV--IFDEAHQLPETATLFFGETLSTTQFLELARDSV 340

Query: 260 SSAQATLRGAIDWLEKVGKTSAKLQNQLKSYNIIAPAQAMLDHINDLTSLLTSVAQYCDG 319
           +      R  +DW+    K  A L+   +   +               S+  S+ Q  D 
Sbjct: 341 AEGLGHARETVDWV----KLGATLERAARDVRLAFKED----------SVRLSIGQLAD- 385

Query: 320 QAAKFDNPE----RRIRFEHGKLPAALTMLAENLATASSSALKQFNKMLVLLNEAIKDGE 375
                D+P       +  E   L +AL   AE  A +  + L++  ++  +L        
Sbjct: 386 -----DHPLFPALETLETELDALASALAGQAER-AESIGACLRRARELQGVLAGWTTPPT 439

Query: 376 LPKHQSEQLLSETGFMLQRLENLQKLWKMMAKEDSAKGAPMARWVEHLVGKQSDYLFNVS 435
             + ++  + S  G                 K + A      RW+E        +   V 
Sbjct: 440 PTEREAADVASTDG-----------------KTERADPNEKVRWIEV-------FSHTVQ 475

Query: 436 PIEVGYMLETLLWEKAAGV----VLCSATLRALNNFNHFTHQVGLSINDGSRYLAMDSPF 491
             E    +  +  ++ AGV    +  SATL    +F H+  Q+GL+     R + + SPF
Sbjct: 476 LHETPLSVAPIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLN---AKRSMTLPSPF 532

Query: 492 DFQQNATLYLPKMRTEPTDDRYTDELAEQILTLIDGEMA-TLVLFASYWQMEKVADLVRS 550
           D+     LY+P+   +P+   +TD + +  L  I+       +L  +   +++++  +R 
Sbjct: 533 DYPTQGLLYVPRNLPQPSSPMFTDAVFDAALPAIEASGGGVFMLCTTLRAVDRISAKLRD 592

Query: 551 KIKS-----PLLIQGEASRQQLLQDHKQRCDNGEVSIIFGTGSFSEGLDLPGDYLTNLII 605
            I++     PLL+QG+ASR +LL   +   +    +I+ G+ SF EG+D+ GD L+ ++I
Sbjct: 593 TIEARGWDYPLLVQGDASRTELLDRFRSYGN----AILVGSQSFWEGVDVRGDALSLVVI 648

Query: 606 TKLPFAVPTSPVEQAHAEYIKAKGGNPFLQLTIPDASRKLIQSCGRLLRKEEDYGRITIL 665
            KLPFA P  PV  A  E +  KG +PF    +P A   L Q  GRL+R E D G + I 
Sbjct: 649 DKLPFAPPDDPVLSARLEALTKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMIC 708

Query: 666 DRRLVTKRYGKSLLDALPPFRQVIE 690
           D RLV K YG+ +  +LPPF++  E
Sbjct: 709 DTRLVDKPYGRRIWQSLPPFKRTRE 733