Pairwise Alignments

Query, 876 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 884 a.a., TonB-dependent receptor domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  408 bits (1049), Expect = e-118
 Identities = 299/909 (32%), Positives = 438/909 (48%), Gaps = 58/909 (6%)

Query: 1   MYKNSLLANSVRFALVGGAAMTAFTAPAVFAADEQAADKVERIEVTGSRIKRSDLEGASP 60
           M  NS L  +VRFAL+GGA   A +  +VFAA++  A KVERIEVTGSRI+R+D+E A P
Sbjct: 1   MRANSTLTKAVRFALIGGATTAALSTMSVFAAEDDNA-KVERIEVTGSRIQRTDMESALP 59

Query: 61  VTTITADDMKVEGNFTVADALRNSNLNSFGSFSERSGSSAQSQATINLRGAGSSRTLVLI 120
           VT ++A+D+   G   V+  L     N+ GSF   +GSSA + A+  +RG GS+RTL LI
Sbjct: 60  VTVLSAEDIAKTGLSDVSAVLAQMPFNTAGSFISDAGSSASNHASSGMRGLGSNRTLTLI 119

Query: 121 DGKRFPGSPTLGGSSANLNAIPMAAVERIEILTDGASSTYGSDAIAGVVNIIMKKNFQGI 180
           +G+R   S T GG + NLN IPM A+ERIEIL DGAS+ YGSDAI GV+NII+KK F G+
Sbjct: 120 NGRRIAPSATFGGDATNLNLIPMDAIERIEILRDGASAIYGSDAIGGVINIILKKTFDGL 179

Query: 181 EFNVGGGSRDRDGGLTSKEFSVVAGYEMDKGNITFAFDHQDRKGIADGDRAFSAPWMRDL 240
            F+   G+  + GG   K  SV  G   DK +     +H+    +  G R        + 
Sbjct: 180 AFDAKFGNPTQ-GGRDEKSASVTFGNTSDKSSSLVIIEHKQFDPLEGGQRPHLTANWDEK 238

Query: 241 NGDGEIQA----YSETDGWSIYGA--TIASPDFSEAQASPLCDDLAAQYGDNVFKTVKAD 294
            G   + A    Y       I GA  T + P ++  Q      D  A   D +  T KA 
Sbjct: 239 YGRSALYAPEGTYRPVASRPIKGADGTFSDPVYTGLQVPG--KDCPA---DRIV-TSKA- 291

Query: 295 DDWGPGSTYCMYAYGNVSYNKASVDRNTVYVDANYEIAEDVEWFGRIMFTQNNSFGRYAP 354
                  + C + + + +       +++V+ +  Y I +++EWFG+ +  ++ S      
Sbjct: 292 ------GSACGFNHFDGTDYLPDQTKDSVFSNMTYRITDELEWFGQAIVMRDKSI---TS 342

Query: 355 PAAAWNN---MSADNPHNPY-----GEETRGYFRWVGIGTRDGNVDDYNQDYLTGLRGSI 406
             A W     ++ADNP NP        E + Y R  G+  R    D    D +TGL   +
Sbjct: 343 STALWTPNLYIAADNPLNPTFGTANASEVQAYHRLKGVADRTTEFDSNVVDVVTGLNLEL 402

Query: 407 SAWNDATWEFYYHYNKADNKSIGEYYLSYSGLAYNEANGIDLGSEAGVNNMKATTLT--- 463
            A    +  +Y  Y+        + Y+    L      G+      G N  +AT  T   
Sbjct: 403 DA---GSLSWYVQYSDQIVNIETDSYVFEDKLQEAVDKGLYNPFVEGGNATQATLDTFLH 459

Query: 464 --QDRATFHQYNAGIGFDAF---ELPGGAVAHYFGLEYFEQDFASIYDAQSEAGLIGGSA 518
               +AT +    G+ + A     LPGG + +  G+EY + ++    DAQ  AG + G+ 
Sbjct: 460 TATRKATSNTTGTGLSWAALAPISLPGGDLGYAVGMEYQKIEYKDTRDAQQAAGNVLGTY 519

Query: 519 GNSAGGDRQVWAAFYEAAMPLTDTIELNIAARYDDYS--DFGNNVAPKASVRWQALDNLV 576
           G  + GDR   AAF E  +P+ D + + +A+RYD YS  D G  ++   +VR++ALDNLV
Sbjct: 520 GGDSAGDRSYKAAFVELELPVLDHLNVKLASRYDQYSLPDVG-QLSNSVNVRYEALDNLV 578

Query: 577 LRASYSEAFRAPALDQLYAATTFSADDGTDYPYCVS------NGIADCPEKQYDTYIRAN 630
           LRASY + FRAP+LD L      S D  TD   C S       G   C + QY      N
Sbjct: 579 LRASYGQGFRAPSLDDLLGEPATSYDYVTDTTLCQSLPADQQKGNPACEDTQYLRKSSGN 638

Query: 631 KDLGPETSEYINLGLAWDIVDNFGIKVDYFDLKIDDVISRRSITNVMRGIASGNLAPSDT 690
           K+L PE S   + G  W+I +N    VDY++++I D +S      ++   A G L   D 
Sbjct: 639 KELEPEKSAQYSFGAVWNITENIDFVVDYYNIEITDQVSYIDAQTIVDLEAIGGLGAYDP 698

Query: 691 FYVVRAPGEAGKLGKALEVGTGYGNSDKLQIKGIDVGLNGNFE-TDFGDFGIAWTNSFVL 749
            Y+       G +    E+G G  N D +Q  G+DV    NF+  D G F  A   ++ L
Sbjct: 699 NYIYVKRKADGTID---EIGAGNINMDGVQTSGLDVSFTSNFDLADLGTFKFAVEGTYAL 755

Query: 750 EYVEEVEGGSGAIDTAGWSGQPEYKSVFTTTYTMGDHRVSWNMNYTDSTYESSKSVGDTI 809
           EY E+    +   D  G  G P  +   T +Y + D   S    Y DS    +    +  
Sbjct: 756 EYTEQASPIAKRYDVLGTKGYPPLRFNTTFSYAIDDFSTSLIAKYIDSYDGETPQQQEVG 815

Query: 810 VPEGSLDSWLIHNISYTYDAGSFGAIMLGVNNLTDEDPVLSSDGKFE--NADLYNNYGRE 867
             +    S+   ++++ YD  S+G + +G  NL D  P ++    +   + D +N  GR 
Sbjct: 816 TNKQDFSSFTTWDLTFNYDFNSYGNVTVGARNLFDAMPAVNYSLGYPGYDTDTHNILGRV 875

Query: 868 YRASYTLKF 876
             A Y +KF
Sbjct: 876 VFAGYKVKF 884