Pairwise Alignments

Query, 415 a.a., tetratricopeptide domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 392 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  124 bits (310), Expect = 6e-33
 Identities = 96/365 (26%), Positives = 178/365 (48%), Gaps = 10/365 (2%)

Query: 45  SAKKVQKSFEAYQEGNIDEAIAVLLEASPRDAFDKAYIARMLGNFYAEKNQMGTAIKYLK 104
           +A KV K+ +  QE  + EAI +L +A    ++D+AY+ARMLG FY +  Q+  AI  LK
Sbjct: 27  TASKVVKANQLAQENKVKEAIQILKQAELSRSYDRAYVARMLGVFYWQNEQIPAAIASLK 86

Query: 105 QAVDADVLGGTDHGATLRLYADLLIQEKKFKESIPYYYEWMKF--TCKEDPQVYRRIGIA 162
            AV+++ L       T ++ ADLLI +++++ ++ +YY   +     ++  +++ RI   
Sbjct: 87  LAVESNELQDDQAWTTRKMLADLLISQQEYRSALKHYYTLAQAIPADQKGNELWLRISQL 146

Query: 163 YSELKEWDKVLGVVDKGLSISTKPDKGLYQMKLTAYFNKKDYKNAIKVLETMVPLFQEDG 222
           + +++EW  VL  + +     TK       ++L A  N + +K  I  L+ ++ L  +  
Sbjct: 147 HFQMQEWKAVLNGMQQYAQFQTKDAVLPLSLQLGAQLNLEQWKPGILTLKRLLVLEPQKT 206

Query: 223 RLWVQLAQFYLMTESYDKSLATYDLAYKNGFLETSGNITRLSQLLAQNGSPYRAAKIYEK 282
             W QL    L      ++L+T  LA          ++  L+QL AQNG P RAA++ E 
Sbjct: 207 EWWRQLVSLELRVGQKKEALSTLALAKMQKVALNQQDLRLLAQLYAQNGIPERAAQVMES 266

Query: 283 HMKSGLIKEDEKTFSILGGFYHNAKELKEAADYYGKAAAINNDGKLYLKQARLLTLQEKH 342
             ++   + +++  +    ++  AKE  +A   +  AA    D K +   A+LL  +  +
Sbjct: 267 LDEA---QSNQQLITERAIYWQRAKEWDKAIATWRLAA--TKDAKYHWHVAQLLLQEGHY 321

Query: 343 KEAIPVLKKALAAGGVSEGEVEFELTLAYLGTKQIKAAYNACLKAAKDEKTKRSATSYLA 402
           ++A+  L +        + +V    T A     Q +AA     K A   ++  SA  ++ 
Sbjct: 322 QQALAELDQVKERD--KQAQVALAKTRALYKLNQFEAAL-VQAKRADSLQSSESAKQWIK 378

Query: 403 YIKEK 407
           Y+ ++
Sbjct: 379 YLSQQ 383